EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS105-21169 
Organism
Homo sapiens 
Tissue/cell
IMR90 
Coordinate
chr12:125411700-125413340 
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
RESTMA0138.2chr12:125412744-125412765CTCAGTACCTAGAACAGTGCC+6.31
SPI1MA0080.4chr12:125412376-125412390AAAAAGAGGAAGTG+7.38
SPICMA0687.1chr12:125412376-125412390AAAAAGAGGAAGTG+6.4
ZNF263MA0528.1chr12:125412183-125412204GGAGGAGGTGGAGACGGGAAA+6.39
Number of super-enhancer constituents: 82             
IDCoordinateTissue/cell
SE_00230chr12:125411456-125414225Adipose_Nuclei
SE_01093chr12:125411557-125413152Adrenal_Gland
SE_02134chr12:125411633-125413338Aorta
SE_02432chr12:125411810-125413784Astrocytes
SE_02966chr12:125411998-125413533Bladder
SE_03321chr12:125411615-125413129Brain_Angular_Gyrus
SE_04055chr12:125411362-125413554Brain_Anterior_Caudate
SE_05165chr12:125411463-125413600Brain_Cingulate_Gyrus
SE_06190chr12:125411091-125413754Brain_Hippocampus_Middle
SE_06843chr12:125411338-125413761Brain_Hippocampus_Middle_150
SE_08021chr12:125411376-125413623Brain_Inferior_Temporal_Lobe
SE_08844chr12:125411932-125412386Brain_Mid_Frontal_Lobe
SE_08844chr12:125412463-125412937Brain_Mid_Frontal_Lobe
SE_08844chr12:125412949-125413138Brain_Mid_Frontal_Lobe
SE_09364chr12:125411353-125413634CD14
SE_10520chr12:125411652-125413166CD19_Primary
SE_12257chr12:125411785-125413609CD3
SE_13292chr12:125411852-125412444CD34_Primary_RO01480
SE_13397chr12:125411363-125413340CD34_Primary_RO01536
SE_14431chr12:125411336-125414670CD4_Memory_Primary_7pool
SE_18055chr12:125411346-125413985CD4p_CD25-_CD45ROp_Memory
SE_18766chr12:125411457-125414114CD4p_CD25-_Il17-_PMAstim_Th
SE_19422chr12:125411606-125413648CD4p_CD25-_Il17p_PMAstim_Th17
SE_20264chr12:125411549-125413648CD56
SE_20773chr12:125411492-125413585CD8_Memory_7pool
SE_22892chr12:125411591-125413778CD8_primiary
SE_23158chr12:125411676-125414001Colon_Crypt_1
SE_23827chr12:125412044-125412411Colon_Crypt_2
SE_23827chr12:125412430-125413962Colon_Crypt_2
SE_24836chr12:125412015-125413829Colon_Crypt_3
SE_25623chr12:125411372-125413353DND41
SE_25834chr12:125411372-125413985Duodenum_Smooth_Muscle
SE_26681chr12:125411510-125413959Esophagus
SE_27703chr12:125411339-125413998Fetal_Intestine
SE_28633chr12:125411373-125414078Fetal_Intestine_Large
SE_29734chr12:125411359-125413784Fetal_Muscle
SE_31023chr12:125411601-125413263Fetal_Thymus
SE_31649chr12:125411565-125414206Gastric
SE_32526chr12:125411674-125413476GM12878
SE_33054chr12:125412017-125412365H1
SE_34384chr12:125411585-125414402HCT-116
SE_34668chr12:125411366-125414677HeLa
SE_35911chr12:125411589-125414827HMEC
SE_37255chr12:125411447-125414147HSMMtube
SE_38138chr12:125411363-125414688HUVEC
SE_39917chr12:125411534-125413218K562
SE_40930chr12:125411539-125414209Left_Ventricle
SE_42024chr12:125412043-125412410LNCaP
SE_42298chr12:125411606-125414488Lung
SE_44403chr12:125411687-125413247NHDF-Ad
SE_44876chr12:125411652-125413941NHLF
SE_46113chr12:125411528-125413227Osteoblasts
SE_47332chr12:125411471-125414296Panc1
SE_48238chr12:125411379-125414411Psoas_Muscle
SE_48805chr12:125411573-125414153Right_Atrium
SE_50218chr12:125411599-125414147Sigmoid_Colon
SE_51163chr12:125411334-125414248Skeletal_Muscle
SE_52044chr12:125411708-125412430Skeletal_Muscle_Myoblast
SE_52044chr12:125412467-125413614Skeletal_Muscle_Myoblast
SE_52416chr12:125411463-125414291Small_Intestine
SE_53363chr12:125411372-125414057Spleen
SE_54757chr12:125411356-125413924Stomach_Smooth_Muscle
SE_55437chr12:125412024-125413094Thymus
SE_55862chr12:125411695-125413162u87
SE_57189chr12:125411636-125411908VACO_400
SE_57189chr12:125411954-125412416VACO_400
SE_57189chr12:125412417-125414201VACO_400
SE_57479chr12:125411883-125412404VACO_503
SE_57479chr12:125412436-125414050VACO_503
SE_58219chr12:125412041-125412416VACO_9m
SE_58219chr12:125412574-125412879VACO_9m
SE_58459chr12:125390622-125426140Ly1
SE_59316chr12:125398143-125425844Ly3
SE_59670chr12:125390325-125426106Ly4
SE_60560chr12:125385312-125426018DHL6
SE_61223chr12:125398158-125425925HBL1
SE_61569chr12:125389012-125425986Toledo
SE_62372chr12:125386297-125426052Tonsil
SE_63850chr12:125411694-125413628HSMM
SE_64282chr12:125411554-125414022NHEK
SE_65546chr12:125411153-125414215Pancreatic_islets
SE_67582chr12:125411695-125413162u87
Number: 1             
IDChromosomeStartEnd
GH12I124926chr12125410916125414858
Enhancer Sequence
CAAAAAAAAA GAACGAAATG GATGAACACT TCCACATGCG AGCACTGCCT TTTTCTTGCT 60
TTCCTGTAAC AGTGTGGCAC GCAACGAGGC CAGAGACAAC CACAGAACCA GAGTCCCGTT 120
TACCTGCCGG GTTTATTCTT CATAGGAAGA GTAAGGAAAA ATACGGAAGA ATGGTAAAAA 180
CGTACTTGGC CTCCCCGTCG GGGAATCGAA CCCCGGTCTC CCGCGTGACA GGCGGGGATA 240
CTCACCACTA TACTAACGAG GACCGCCCAT AAAACAGGTT CTTCAAGAGA CTGTTTTAAG 300
GTAAACGTAG CTTTCCCTAA ACACTTTCCA AAGAATTAAG TATCTTGTAT TTCCCACAAA 360
ACAACAGGTC CGACTTGACT TCATGCCATT TTAAGGCGAT CGTTTCCAGT TCAGAAAGCA 420
GACGTTAAAA AACAGAAAGC AAAAATGAAC AAACAGGCAT CAACAAATGT GCATTTGAGA 480
CATGGAGGAG GTGGAGACGG GAAAAACTTG ACCTTATTTG ATTTACCCAA ACGGGGAGTG 540
GAGGGGGAGT TTCCTTTCCC TCTGGCTCCT CGCGGACACT GCTCGGGGCT TTGTTAAATA 600
TAGAAAGTAA AAGCCTTTGA TCAATTGGAA GGAATCGGCT TCGTCTATGC ACCTCCTTTT 660
TCCCCCGGGG GGAAGGAAAA AGAGGAAGTG CCGAAACCCG GGATCGAACC AGGGACCTTT 720
AGATCTTCAG TCTAACGCTC TCCCAACTGA GCTATTTCGG CAGCCGTTAC GACTGCGATG 780
CTCTTTTATC CTCCTGGTCG TTTTGCCGCC CCGGGTCTTT GACACAGACG CTGGGAATGC 840
AGGTTCAGCA GGGACTGCGT GCGGTGGCCT GTTCGTCTGT CAAGGCCACG ACCTCTGAGA 900
AGCCTTCTCT GATCACATCT CCCGCCATGG CCCAGCCTTT ACTATTTACT GTTAACTTTA 960
TCATTTTCCT TGTCCGTCTC CCCAGCAAGC ATGACAAACA CAAGAGGAGC AGGAACCTTG 1020
TCTACCTCGG GCACCGCTGT GTCCCTCAGT ACCTAGAACA GTGCCTAGCA CATTGTGGGG 1080
CCTTGACAAA TATTTGTTGA CTGATTGACT GACTGACTAC ATGAATGAAT GCATGCGTGA 1140
ATGAATGAAT CCCACCTGGT TCAGAGCTCG GGTTTCTCAA GCCCCCTTCT CCGCGCAAAG 1200
GAAAAAGGTC ATCCCCTGGG CGCAGCTCCG CAAGCAGCGC GAGGCGTGGC AGGGATGTTG 1260
ACCTCGCCAG GGCCTACGGG AGGACGCGTC AGCCGGAACG CAGCGTTCCT CGGGCAGGGA 1320
GTGACTCAGA TCCGGCCTCC GAGTGTGGCC TCCATGCTTG TGAGCACCTG CTCAGCTTCC 1380
AAGCGGGAAG ACGTCAACAG GTTGGCATCC AGACTGGGCT CTTCGCTTCG GGAAGTGGGC 1440
GGTTGGACGG TGCGGGTGTT GTCCGGGAAA GAATCAGGAA ATCCCTCATG ACCTGAAGTC 1500
ATTCAAGAAG CATTCGCCGA GCACCTAATA ATCGTCTGAC CCATCAACAA ATACAATTAA 1560
CAGGCCAGGT GCGGGGGCTC AACCTAGTAA TCCCAGAGCT TTGGGAGGCC CAGGTGAAAG 1620
CAGACTCGCT TGTGGGTAGG 1640