Tag | Content |
---|
EnhancerAtlas ID | HS105-20399 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr12:110301520-110302560 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Tcf12 | MA0521.1 | chr12:110301871-110301882 | CAGCAGCTGTT | - | 6.32 |
|
| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_03507 | chr12:110300966-110302640 | Brain_Angular_Gyrus | SE_04375 | chr12:110298180-110304737 | Brain_Anterior_Caudate | SE_05161 | chr12:110297578-110307048 | Brain_Cingulate_Gyrus | SE_06182 | chr12:110297694-110307274 | Brain_Hippocampus_Middle | SE_07005 | chr12:110297849-110307088 | Brain_Hippocampus_Middle_150 | SE_08309 | chr12:110298081-110307128 | Brain_Inferior_Temporal_Lobe | SE_26707 | chr12:110301024-110304762 | Esophagus |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH12I109863 | chr12 | 110301116 | 110303814 |
|
Enhancer Sequence | TGCTGTGAGA GAGAGGTGTC ACACGTGCAA AGTGAGGGCT CAAAGCACTG ACCACGATTG 60 TTTTTACTGC CACTGGCTGG TTTTCAACCA AAGCCTTCCA GTGAAGAAGA GATGACGGCA 120 GGGCCTGATG ACAGATCACC ATCGACCATG GGTGGCTTAT TAGCTTTTCT TAATGACTCC 180 GGTCATTCAA CATGCATTTC AGAGATGCAG AAAAATGTTA TGCAGCATCC TTGTGCAGTT 240 CTGAGCAGCC CTGCCCTGGT GGCAGGGAGA AAGGCTTTTT GTTTTGTGTT CTCCTAACCA 300 TGAGCTACGA GGGTCACGAG GCCACCATGG TCAGCAGAAG CTGGGCCCCA ACAGCAGCTG 360 TTATTGTGTG TGGGGCCACC ACACAGGGCC AGAGCTCCCG CTCAACAGTA GGGGAGGAAT 420 GTGGGGCCTC AAATGCACTT CTGGGGCTGG GAGCCTAGCA GAAGAGAGGG GAGGCGAGGC 480 AGGGGCTGGG AACAAGACCC CAGACTACTT CCATGCTCTA CCCACAGGGA GCCACCAGCA 540 GGAAAGGCAG CTCTGTATGC ATCTCTGTGT TACATAAACA AGCACGCTGA AGTGGGTTTG 600 GAAGCATCTG GAGGTGGGCT GCCTGCAATT AGCAGTGGCG TCAACCTGGG CAGTGGCACT 660 GAAGCAGTGG CATCCACAGT CCTGGGTTTG AATCTCAGCT CTGGTGTGAG TTTGGCCAAG 720 TGACTTAACC ACTCCAGGTT CAGGCCCTTC GGTTTCTACA GCCCAGAGGT GCTATGCAAA 780 CAGGAAGTGC TCTGTATATG GTTGGGCTGA AGCCTGTTTC AACATCACCC ACCCAAGGCT 840 CTGGGCTTAT GTTTGCCTTT GGTGCAGTCC AAGGACATCA AGTCACAGAA AAGCCAAATG 900 ACTTGCCCAG GTTACACTCC AGGGAGTGCC AGGAACTCAG ACACAATTCC AGAGCCAAAG 960 CTGCTTCCAC TACACCCTTA ACCTTTCTGT CTAGAATGTT ACCATTCTTT GAACTCAAAG 1020 AATGTTTCTT TGAGGTCCTG 1040
|