EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-18757

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr12:53607480-53607800

Target genes

Number: 22
Name	Ensembl ID

KRT18	ENSG00000111057
KRT8	ENSG00000170421
AC107016.1	ENSG00000225410
EIF4B	ENSG00000063046
TENC1	ENSG00000111077
RP11	ENSG00000257337
SPRYD3	ENSG00000167778
IGFBP6	ENSG00000167779
HIGD1AP1	ENSG00000258016
ZNF740	ENSG00000139651
CSAD	ENSG00000139631
ITGB7	ENSG00000139626
RARG	ENSG00000172819
MFSD5	ENSG00000182544
PFDN5	ENSG00000123349
C12orf10	ENSG00000139637
AAAS	ENSG00000094914
SP1	ENSG00000185591
PRR13	ENSG00000205352
PCBP2	ENSG00000197111
MAP3K12	ENSG00000139625
TARBP2	ENSG00000139546

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr12:53607486-53607507	GGAGGTGGGGGGTGGAGGAGG	+	6.21
ZNF263	MA0528.1	chr12:53607522-53607543	GGGGGATGGGGAAAAGAGGGA	+	6.53
ZNF263	MA0528.1	chr12:53607598-53607619	GGAGAAGGCAGAGGTGGAGGA	+	6.71

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_19284	chr12:53606378-53619863	CD4p_CD25-_Il17p_PMAstim_Th17
SE_26607	chr12:53606764-53620310	Esophagus
SE_34602	chr12:53607257-53608089	HCT-116
SE_42825	chr12:53607203-53619908	Lung
SE_49119	chr12:53607174-53618334	Right_Atrium
SE_50443	chr12:53607716-53619576	Sigmoid_Colon
SE_54028	chr12:53607202-53618364	Spleen
SE_62837	chr12:53591271-53631068	Tonsil
SE_68805	chr12:53606828-53609841	H9

Enhancer Sequence

GCATCTGGAG GTGGGGGGTG GAGGAGGGTT AGTGCTGTTT CTGGGGGATG GGGAAAAGAG 60
GGAATGAGTG GAAAGTGAGG AGGTTAGGTC CCCAGTGAGT GCAACCTGAA GCAGGCATGG 120
AGAAGGCAGA GGTGGAGGAT CTGAGGCTTG GCAGGGGTAG TCCCGGGAAG TCAGGAGGAG 180
ACAGGGCATC CAAAAGTCTA GGATCAGGTC ATAGGGGCAG AGGCTAAGAC GAAAAGAGAG 240
CTGAGGAGTC CCACATGTGT GGCAGGGGGT GCAGGGTAAG GAAATCTTTG CATGGATCAA 300
GGAATTGTTG AGGGTCCCAT 320