EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS105-17430 
Organism
Homo sapiens 
Tissue/cell
IMR90 
Coordinate
chr12:6644640-6645650 
Target genes
Number: 54             
NameEnsembl ID
CD9ENSG00000010278
PLEKHG6ENSG00000008323
TNFRSF1AENSG00000067182
LTBRENSG00000111321
SCNN1AENSG00000111319
RP1ENSG00000256433
CD27ENSG00000139193
LOC678655ENSG00000215039
TAPBPLENSG00000139192
VAMP1ENSG00000139190
NCAPD2ENSG00000010292
MRPL51ENSG00000111639
RP5ENSG00000255966
GAPDHENSG00000111640
IFFO1ENSG00000010295
NOP2ENSG00000111641
SCARNA11ENSG00000247853
CHD4ENSG00000111642
LPAR5ENSG00000184574
ACRBPENSG00000111644
ING4ENSG00000111653
ZNF384ENSG00000126746
C12orf53ENSG00000139200
COPS7AENSG00000111652
PTMSENSG00000159335
MLF2ENSG00000089693
LAG3ENSG00000089692
CD4ENSG00000010610
GPR162ENSG00000250510
U47924.11ENSG00000256010
LEPREL2ENSG00000110811
GNB3ENSG00000111664
U47924.25ENSG00000237240
CDCA3ENSG00000111665
USP5ENSG00000111667
TPI1ENSG00000111669
RPL13P5ENSG00000240370
LRRC23ENSG00000010626
DSTNP2ENSG00000248593
SPSB2ENSG00000111671
ENO2ENSG00000111674
ATN1ENSG00000111676
C12orf57ENSG00000111678
PTPN6ENSG00000111679
SCARNA12ENSG00000238795
EMG1ENSG00000126749
PHB2ENSG00000215021
U47924.19ENSG00000255896
C1SENSG00000182326
LPCAT3ENSG00000111684
C1RENSG00000159403
ABC12ENSG00000205885
C1RLENSG00000139178
CLSTN3ENSG00000139182
Number of super-enhancer constituents: 52             
IDCoordinateTissue/cell
SE_01052chr12:6641120-6648009Adrenal_Gland
SE_01797chr12:6641057-6646942Aorta
SE_02453chr12:6640823-6646057Astrocytes
SE_03492chr12:6643861-6645964Brain_Angular_Gyrus
SE_04287chr12:6640972-6646996Brain_Anterior_Caudate
SE_05332chr12:6640719-6646284Brain_Cingulate_Gyrus
SE_06104chr12:6634289-6652782Brain_Hippocampus_Middle
SE_07088chr12:6640649-6646933Brain_Hippocampus_Middle_150
SE_08199chr12:6639174-6648545Brain_Inferior_Temporal_Lobe
SE_09914chr12:6640810-6648512CD14
SE_19625chr12:6640885-6648376CD4p_CD25-_Il17p_PMAstim_Th17
SE_23524chr12:6641099-6646019Colon_Crypt_1
SE_24159chr12:6641334-6645692Colon_Crypt_2
SE_25120chr12:6641501-6645666Colon_Crypt_3
SE_26082chr12:6640738-6646234Duodenum_Smooth_Muscle
SE_26855chr12:6641044-6650860Esophagus
SE_28112chr12:6640733-6645881Fetal_Intestine
SE_29041chr12:6640458-6645815Fetal_Intestine_Large
SE_29717chr12:6640832-6647037Fetal_Muscle
SE_31984chr12:6641174-6645965Gastric
SE_33655chr12:6640726-6645978H2171
SE_34479chr12:6640776-6647043HCT-116
SE_35085chr12:6639660-6651120HeLa
SE_36810chr12:6640811-6646800HMEC
SE_37055chr12:6640622-6655597HSMMtube
SE_39097chr12:6640977-6646202IMR90
SE_40788chr12:6640835-6651077Left_Ventricle
SE_42058chr12:6641103-6646053LNCaP
SE_42446chr12:6640884-6648242Lung
SE_44234chr12:6640809-6647126NHDF-Ad
SE_44823chr12:6640731-6647004NHLF
SE_46050chr12:6639530-6648544Osteoblasts
SE_48132chr12:6639708-6652567Psoas_Muscle
SE_48689chr12:6640903-6648491Right_Atrium
SE_49757chr12:6641181-6645172Right_Ventricle
SE_50270chr12:6640944-6652634Sigmoid_Colon
SE_51214chr12:6640643-6648737Skeletal_Muscle
SE_52047chr12:6641123-6645373Skeletal_Muscle_Myoblast
SE_52680chr12:6640930-6652710Small_Intestine
SE_53477chr12:6640939-6648393Spleen
SE_54922chr12:6640623-6646043Stomach_Smooth_Muscle
SE_55550chr12:6641250-6645979Thymus
SE_56147chr12:6640810-6645852u87
SE_56942chr12:6643641-6646892VACO_400
SE_57788chr12:6641369-6645636VACO_503
SE_58262chr12:6643602-6645606VACO_9m
SE_60842chr12:6640982-6650146DHL6
SE_61385chr12:6640767-6650353HBL1
SE_63832chr12:6641123-6645812HSMM
SE_65784chr12:6639648-6645821Pancreatic_islets
SE_67590chr12:6640810-6645852u87
SE_68771chr12:6640982-6646956H9
Enhancer Sequence
TCAAAGAAGT GGGTTTATGG AGGTCCTCTT GTGTCCCCTC CCCGCAGAGG TGTGGTGGCT 60
GTGGCATGGT GCCAAGCCGG GAGAAGCTGA GTCATGGGTA GTTGGAAAAG GACATTTCCA 120
CCGCAAAATG GCCCCTCTGG TGGTGGCCCC TTCCTGCAGC GCCGGCTCAC CTCACGGCCC 180
CGCCCTTCCC CTGCCAGCCT AGCGTTGACC CGACCCCAAA GGCCAGGCTG TAAATGTCAC 240
CGGGAGGATT GGGTGTCTGG GCGCCTCGGG GAACCTGCCC TTCTCCCCAT TCCGTCTTCC 300
GGAAACCAGA TCTCCCACCG CACCCTGGTC TGAGGTTAAA TATAGCTGCT GACCTTTCTG 360
TAGCTGGGGG CCTGGGCTGG GGCTCTCTCC CATCCCTTCT CCCCACACAC ATGCACTTAC 420
CTGTGCTCCC ACTCCTGATT TCTGGAAAAG AGCTAGGAAG GACAGGCAAC TTGGCAAATC 480
AAAGCCCTGG GACTAGGGGG TTAAAATACA GCTTCCCCTC TTCCCACCCG CCCCAGTCTC 540
TGTCCCTTTT GTAGGAGGGA CTTAGAGAAG GGGTGGGCTT GCCCTGTCCA GTTAATTTCT 600
GACCTTTACT CCTGCCCTTT GAGTTTGATG ATGCTGAGTG TACAAGCGTT TTCTCCCTAA 660
AGGGTGCAGC TGAGCTAGGC AGCAGCAAGC ATTCCTGGGG TGGCATAGTG GGGTGGTGAA 720
TACCATGTAC AAAGCTTGTG CCCAGACTGT GGGTGGCAGT GCCCCACATG GCCGCTTCTC 780
CTGGAAGGGC TTCGTATGAC TGGGGGTGTT GGGCAGCCCT GGAGCCTTCA GTTGCAGCCA 840
TGCCTTAAGC CAGGCCAGCC TGGCAGGGAA GCTCAAGGGA GATAAAATTC AACCTCTTGG 900
GCCCTCCTGG GGGTAAGGAG ATGCTGCATT CGCCCTCTTA ATGGGGAGGT GGCCTAGGGC 960
TGCTCACATA TTCTGGAGGA GCCTCCCCTC CTCATGCCTT CTTGCCTCTT 1010