EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-17362

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr12:6140960-6141470

Target genes

Number: 13
Name	Ensembl ID

RP1	ENSG00000256103
TNFRSF1A	ENSG00000067182
LTBR	ENSG00000111321
LOC678655	ENSG00000215039
NCAPD2	ENSG00000010292
MRPL51	ENSG00000111639
GAPDH	ENSG00000111640
CHD4	ENSG00000111642
COPS7A	ENSG00000111652
PTMS	ENSG00000159335
MLF2	ENSG00000089693
USP5	ENSG00000111667
TPI1	ENSG00000111669

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr12:6140984-6141005	GGGGGTGGGGAAGGAGGGGGA	+	6.92
ZNF263	MA0528.1	chr12:6140990-6141011	GGGGAAGGAGGGGGAGGGAAG	+	7.13
ZNF263	MA0528.1	chr12:6140993-6141014	GAAGGAGGGGGAGGGAAGGAA	+	7.47

Enhancer Sequence

CCAGGTGCCT GCAGTGAGTG GGGTGGGGGT GGGGAAGGAG GGGGAGGGAA GGAAGGTGAC 60
ATGTGGCCTG CTTCGATGGA TGCATCAGGC TCAAAGGCCT TGCCTAGAGC CCATTAGAGT 120
CCCACTGGAG CCTTGCCTAG AGTCCCACCC AGGTAACTGG GACAGTTTGA CCACAGGGCA 180
CTTTGTGGCT CTGAATTCTG GTTGAATCCC TCTGCACTGC TGGCCCAGAA ATGGAACCAA 240
AGATGGTTTG ACACAGCTCC ATGGGTCCTG AGCTACCAAG TCGAGATGAG TAGAGAGGAT 300
AAGGAGCTCT GGTCCTTGTT GGTCAATTGC ATAGAAAATT AAGCAAAAGG GGACACATTC 360
CTGGCAAATG CCTCCCCCAT GGTGGCTATT ATTGTGATGT GATGAAAAAG AAAGATAAAA 420
TGTTCAACTT AGAAAAACAG AGTGTGTCGC TTGAACCCGG GAGGCGGAGG CTGCAGTGAG 480
CCGAGATCGC ACCACTGCAC TCCAGCCTGG 510