EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS105-17308 
Organism
Homo sapiens 
Tissue/cell
IMR90 
Coordinate
chr12:4383400-4385170 
Target genes
Number: 2             
NameEnsembl ID
SNPs
Number: 2             
IDChromosomePositionGenome Version
rs3217792chr124384696hg19
rs76895963chr124384844hg19
TF binding sites/motifs
Number: 14             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
ONECUT1MA0679.1chr12:4384793-4384807TTTATTGATTTTTT-6.89
ONECUT2MA0756.1chr12:4384793-4384807TTTATTGATTTTTT-7.52
ONECUT3MA0757.1chr12:4384793-4384807TTTATTGATTTTTT-8.12
TBPMA0108.2chr12:4384934-4384949CACCCCCTTTTATAG-6.35
ZNF263MA0528.1chr12:4383586-4383607GAGGCAGAGGGGGGAGGAAAA+6.01
ZNF263MA0528.1chr12:4384226-4384247GGGGTAGGAAGGGGGGGAGGG+6.22
ZNF263MA0528.1chr12:4383877-4383898GGTGGAGGGAGGAGGGAGAAG+6.33
ZNF263MA0528.1chr12:4383582-4383603TGGGGAGGCAGAGGGGGGAGG+6.3
ZNF263MA0528.1chr12:4384625-4384646TCCTCCCTCCCCCTCTCTTCC-6.45
ZNF263MA0528.1chr12:4384613-4384634CTCTTCCTCCTCTCCTCCCTC-6.5
ZNF263MA0528.1chr12:4383874-4383895GGAGGTGGAGGGAGGAGGGAG+6.73
ZNF263MA0528.1chr12:4383881-4383902GAGGGAGGAGGGAGAAGGAGA+7.73
ZNF263MA0528.1chr12:4383884-4383905GGAGGAGGGAGAAGGAGAGAA+8.37
ZNF263MA0528.1chr12:4384617-4384638TCCTCCTCTCCTCCCTCCCCC-9.1
Number of super-enhancer constituents: 31             
IDCoordinateTissue/cell
SE_01106chr12:4381247-4385582Adrenal_Gland
SE_15196chr12:4377567-4386081CD4_Memory_Primary_7pool
SE_16248chr12:4377599-4385481CD4_Naive_Primary_7pool
SE_17264chr12:4377433-4385598CD4p_CD225int_CD127p_Tmem
SE_17668chr12:4377059-4389346CD4p_CD25-_CD45RAp_Naive
SE_18147chr12:4377088-4390775CD4p_CD25-_CD45ROp_Memory
SE_18738chr12:4376994-4390836CD4p_CD25-_Il17-_PMAstim_Th
SE_19306chr12:4377459-4389341CD4p_CD25-_Il17p_PMAstim_Th17
SE_20631chr12:4377465-4384856CD56
SE_21858chr12:4377518-4385596CD8_Naive_7pool
SE_24342chr12:4382783-4385021Colon_Crypt_2
SE_26250chr12:4377282-4387190Duodenum_Smooth_Muscle
SE_27469chr12:4377632-4386344Esophagus
SE_27957chr12:4377480-4391177Fetal_Intestine
SE_29009chr12:4377445-4391106Fetal_Intestine_Large
SE_30751chr12:4377557-4385960Fetal_Muscle
SE_41054chr12:4377574-4393908Left_Ventricle
SE_42886chr12:4379813-4391114Lung
SE_44069chr12:4377650-4387776MM1S
SE_49168chr12:4379807-4385793Right_Atrium
SE_49826chr12:4382868-4384656Right_Ventricle
SE_50487chr12:4377569-4388321Sigmoid_Colon
SE_52709chr12:4377721-4388326Small_Intestine
SE_54249chr12:4377643-4385322Spleen
SE_54909chr12:4379737-4387193Stomach_Smooth_Muscle
SE_58114chr12:4383469-4384062VACO_9m
SE_59114chr12:4370068-4396210Ly3
SE_61171chr12:4376111-4396118HBL1
SE_62859chr12:4377154-4403496Tonsil
SE_67330chr12:4377650-4387776MM1S
SE_68972chr12:4382553-4386773H9
Enhancer Sequence
GGTAGGTCGG GGGGTGGCGC TCGCCAGGAG CCAGGACCCC TCCGGATGCT CGGGTCCCCG 60
GCCGGAGCCC TAAACCTGGG AGAGGGCAAT CCCCGCGCCG GCCTCCCGGC TCCTGTGCGG 120
GAGTTTACCG CGCGCCTTCT GGCGAGACGC GTGGCTTTAT TTCTGTTCCT CTCCAGATAA 180
ACTGGGGAGG CAGAGGGGGG AGGAAAATCT GGGAGAAGCG AGGCTGTCCT GGGCGGGGGT 240
AGGGGAGCAT CCCGCGCGCG TGTTCCTGCA TGTGGCTGCC TCTTCTTCCC ACCCCCCTCG 300
CGACCTGTCT TTTGCGAAGC CGCCGCGGCT GCTTGCGCTG CGGCCAGGAA GAGAGTCGGG 360
GCCTGAAATC GGGACCCCGA GTAGAAAGGC AACCCCCCCC AAAAGGCCAG AGCAAATTCG 420
TCTTGGCCTC AGGTCCCCGC CTGTGGTCGC GACTCCGCGC TGGCACTTCA CCGGGGAGGT 480
GGAGGGAGGA GGGAGAAGGA GAGAAACGGG GAATTCGGGA GCCCCGGAAG TCCCATTGAA 540
GAAACGCGTG TTTCAGGGGA ACCCAAAAGA ACCGCTTCTT GCCCCTCACT CCAAGTCTTT 600
GCCCAGCGAG CCGTGTGCCC ACGTATGCAC AGCTCTGGAC CTGCCGTGGT TTCGCCATGT 660
TGCTTTGCAA ACTCCCTTTG GAAAGGCTGG GAAACGTCGC CCGCTTACCC TCGCACCCCA 720
TTATCCCGGC CACCCCACTT CTAATCGTGC CCTCTCCCCC ACCCCCCACC TCACGAAGAT 780
TACTTACAGT TTGGTTTTCC AGCTTCCTCG GTGCGGAGAT TTGGGTGGGG TAGGAAGGGG 840
GGGAGGGGGT GTGTGTAGGG GGGATACCGG GTCACCCCTG AAGGAGAGGT GGGAGCCCCC 900
CGTGCCTCTT TCCAGGGCTC TCTGCTCCCG TCTTTCCCCT CGCTCGTCAC CGCGTTCCCT 960
AGTTTCTGTC CTTGTGGGCC GCAGCCGGAC ACTCCCGCCG CGGCGCTCAC CCCTTCAAGT 1020
TTCCTCCCGG GATCCAAAGC CCCAGGGGTC GGAATACAGA CCTTTCTGGC ACCCGAAACC 1080
TCTGTTTCGG GAAGCCTGGC TCTTCTTTGG GGTTTTCACG CCAAAAGGGC TTTTCTAGGA 1140
TATTTCCTCG ATTTTTAATT ATTTTTTGAA ACCATCCCCC CCTGCTCCGA CTCCAGCTGC 1200
CGAGGCTGCG GCGCTCTTCC TCCTCTCCTC CCTCCCCCTC TCTTCCCCAC CTCTCCTCAC 1260
CCGCCCCCCC AAAAGCGGCC CCTGGGCCGC AGGGACCCCC CCAGACATTT TTTCCAATTG 1320
TCGGGAATGA TAGAGGAGGA TCTGGGGATC CGGATGAGAC CAAGAAGTGG ACCCCCGGAG 1380
CCTCCAGAAT ATTTTTATTG ATTTTTTGAA AAGATGACGA AATCCAAAAA AGAGTGAGTG 1440
AGTTAGAGTG CGCGAAGGAG TAGCCAAAGG GAGCGTCGCG GAGCTGCCGC GGCTGCTGCG 1500
CACTTCTCCG ACTCCCCGTT TTGGAGCTGT AGTTCACCCC CTTTTATAGG ATCCCTGGGA 1560
ATACCAAAGC ACTGATGGGC TATTCTGATT CACTCCAGTT TCCTCATCTT TGTTCTTTAT 1620
TCTTATCACG CATTCTGGTC CCCTCCCCCT CCCACAAAAA AAAATTAATT TTTTTTGTTT 1680
CGATAGATTA CGCTTTTTTA TTCTTTTTCT CTTTTGCTGA TGCTATGCTC TCCACCCCCG 1740
CCCCCCAACC CTTTCCCACT CCCATTATAG 1770