EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-07504

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:228296170-228296650

Target genes

Number: 16
Name	Ensembl ID

SNAP47	ENSG00000143740
WNT9A	ENSG00000143816
RP11	ENSG00000233003
ARF1	ENSG00000143761
C1orf35	ENSG00000143793
MRPL55	ENSG00000162910
RP5	ENSG00000224566
GUK1	ENSG00000143774
GJC2	ENSG00000198835
C1orf148	ENSG00000203684
IBA57	ENSG00000181873
OBSCN	ENSG00000154358
C1orf145	ENSG00000162913
TRIM11	ENSG00000154370
HIST3H2A	ENSG00000181218
RNF187	ENSG00000168159

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr1:228296438-228296452	ATTCCCATGGGAGT	+	6.43
EBF1	MA0154.3	chr1:228296438-228296452	ATTCCCATGGGAGT	-	6.71

Enhancer Sequence

ACCGCCTGTA GAGGTTTTTC CAAAAGCAGA AGTTGGTCAC TACTCCCAAA GATTCTGAGT 60
CAGCCTGCGG CAGGGCCCAG GCTGTCTGTT CTGGCCGTTA CCGAGTCTGC GAAACCTCTC 120
TGAATGGACT GCAGCCTCAA AAGTGGAGCT GAGGTCATGC CTTGCTTTCT AAGGTCATTG 180
CTAGTTTTAA TAAAAACTCA GTGAAGTGAG GATTGTCATG CTTGCTTAAA GGAGAATGGA 240
GGCCCAGGGC TGCTTTGCTG TGACCTGGAT TCCCATGGGA GTCTGTGCTG AGGTGTGCGA 300
AGTAAAAGCC CAGTTTTCAA TACTCAGATT CCAGGAGATG AGGCTGCACA GAGGCCGAGC 360
GCCCAGCTTC CTCTGGCGTA CCCCTGTCTC TCACCAAGGA AGGGACCTGA AGACAGGTCC 420
GGCTGCCTCT AAAATGGAAA TCCTGCTACG TGTCCTATGC CCACATCCCT CTCCCTCGGC 480