EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS105-06426 
Organism
Homo sapiens 
Tissue/cell
IMR90 
Coordinate
chr1:203247120-203248560 
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
E2F6MA0471.1chr1:203247461-203247472CCTTCCCGCCC-6.62
Nr5a2MA0505.1chr1:203248458-203248473GAGTTCAAGGTCTGT+6.09
STAT1MA0137.3chr1:203247828-203247839TTTCCTGGAAA-6.62
Stat4MA0518.1chr1:203247825-203247839TTGTTTCCTGGAAA-6.53
Number of super-enhancer constituents: 54             
IDCoordinateTissue/cell
SE_03091chr1:203247074-203247846Bladder
SE_03091chr1:203247880-203248546Bladder
SE_03393chr1:203247051-203248704Brain_Angular_Gyrus
SE_03985chr1:203245403-203249724Brain_Anterior_Caudate
SE_04945chr1:203240948-203250868Brain_Cingulate_Gyrus
SE_05898chr1:203241453-203249915Brain_Hippocampus_Middle
SE_06796chr1:203241889-203249856Brain_Hippocampus_Middle_150
SE_08928chr1:203247117-203247655Brain_Mid_Frontal_Lobe
SE_08928chr1:203247975-203248499Brain_Mid_Frontal_Lobe
SE_09289chr1:203246883-203248144CD14
SE_10170chr1:203246995-203248001CD19_Primary
SE_10871chr1:203245633-203248716CD20
SE_14427chr1:203246260-203247786CD4_Memory_Primary_7pool
SE_15994chr1:203247022-203247831CD4_Naive_Primary_7pool
SE_16865chr1:203246428-203247775CD4p_CD225int_CD127p_Tmem
SE_17312chr1:203245754-203248466CD4p_CD25-_CD45RAp_Naive
SE_17785chr1:203245720-203248506CD4p_CD25-_CD45ROp_Memory
SE_18348chr1:203245838-203248118CD4p_CD25-_Il17-_PMAstim_Th
SE_19143chr1:203245882-203247848CD4p_CD25-_Il17p_PMAstim_Th17
SE_22316chr1:203247034-203247922CD8_primiary
SE_23441chr1:203247279-203248035Colon_Crypt_1
SE_24037chr1:203247306-203247864Colon_Crypt_2
SE_24893chr1:203247402-203247966Colon_Crypt_3
SE_25439chr1:203245412-203248503DND41
SE_25807chr1:203245517-203252596Duodenum_Smooth_Muscle
SE_26687chr1:203245533-203249732Esophagus
SE_27668chr1:203246339-203248810Fetal_Intestine
SE_28606chr1:203246285-203248835Fetal_Intestine_Large
SE_29589chr1:203245685-203253045Fetal_Muscle
SE_30896chr1:203245729-203248682Fetal_Thymus
SE_31419chr1:203247047-203248594Gastric
SE_32519chr1:203247148-203248108GM12878
SE_37070chr1:203246292-203252945HSMMtube
SE_40823chr1:203245552-203252663Left_Ventricle
SE_42244chr1:203245476-203249870Lung
SE_47668chr1:203247354-203247787Pancreas
SE_47668chr1:203247801-203248304Pancreas
SE_48192chr1:203242132-203252823Psoas_Muscle
SE_48633chr1:203245440-203248748Right_Atrium
SE_50070chr1:203245530-203248782Sigmoid_Colon
SE_51128chr1:203241929-203254548Skeletal_Muscle
SE_52362chr1:203245445-203248864Small_Intestine
SE_53333chr1:203246076-203248731Spleen
SE_54785chr1:203241747-203252722Stomach_Smooth_Muscle
SE_55095chr1:203247043-203248502Thymus
SE_58291chr1:203236214-203310877Ly1
SE_58901chr1:203236169-203298087Ly3
SE_59628chr1:203236329-203298077Ly4
SE_60396chr1:203236100-203315897DHL6
SE_61013chr1:203236073-203298344HBL1
SE_61446chr1:203236043-203309894Toledo
SE_62225chr1:203236326-203298200Tonsil
SE_63328chr1:203234993-203265727NCI-H82
SE_65315chr1:203245186-203248728Pancreatic_islets
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr1203247590203248072
chr1203247243203247485
Number: 1             
IDChromosomeStartEnd
GH01I203276chr1203245580203253451
Enhancer Sequence
TAGGCGACAG TGAGACTCTG TCTCGAGAAA AAGAAAAAAA GTTGTCATGG TTTGAACCCA 60
TACTTGGTGG CCCCATCTCT GTCTCTGACT GTCTATCTGC CTCTGCCTCC CTCTGTCTCT 120
GCCTGTTTCC TGTGTCTGTC TTTGTCTCTA TGTGTGTGTG TACAAATACA TATAGGTATA 180
TATATTCTGT CTTTCTCTGT TGCTGTCTCT CCCCCGACCA ATCTGATCTG AAGGATCACA 240
GAGCTGGATG GGACAAGGGT CACCATCTCA TCCATTCACA GCCTTTGACC AAGATGGTCT 300
GTGAACCATT GGATGTGGGT TAGGTTTTGA AACAAACTTC CCCTTCCCGC CCCACTTGGG 360
CATCAGTTCA TGCTCAGCTT GGGTTTAACA GTCTCCAGAT TTCCTCTTTG AGCCAAATTC 420
TCACCCTTCC TGCTGCTGTT TGGACACTTG CTTTGGTGTC CTACAGGGAA TAATGATAAG 480
GCAGAGGTCA CAGTCCTGGC CCCCACCCAG CCTTGCCTGC TGCGCAGTGA AACTGGTGTT 540
TGCCGGGGCC GGTCTTGGCC AGGAGAGAGG AGGAGGGGTG GAGGCAGCTG GGGAGTGTGA 600
GCAAGATGCC GCGGGGGCTC GGGGGAGACT GCAGCCAAGT GCTGCGTCTG AGGATATTTA 660
TAGACAGACA CACAGAGAGA CATGCACGCA GGGACAGAGT ACTGTTTGTT TCCTGGAAAC 720
ATGGACTGTT CTCTCAGTCC TACCAGATTT CCCAGGGAGC ATCATACTGA AATAGGGAAA 780
ACTGTGTCTG CTGCCTGGTG TCCGCCCTCC ACATAAGGAG AGATCTGATT CGCTCCACAC 840
CCCCTTGGTA ACTGCAACGA CTGCCCCTAG CCTGGGGAAG CCCTTTCCAG GCGTTCCTGA 900
CTGCCCCGCT CACTTCTCTG TCTCATCTCG CCTCCCAGGC CTCCTTGCGC TACTCCCACA 960
GCAAAACACT GCACCAGTGC TTGCCCTTCT TGGGGGCTTC CTGGCCTTTG CACACACAGC 1020
TCCGTCTGCC AGGAATGCTT TTCCATCCAT TCCTATTCTT CTGGCAAAGC CCTACTCATC 1080
ATCTGCCCAC ACGTCACCTC CTCTGAGGGG TCTTTTCTCA CCTCTCCTCT GAGAGCTTAG 1140
GACTTTGCAT GGTTATGTCG CTGTTGTTAT TTCTATTTAC CTCTGTCTCC GCCTCCAAAC 1200
CATAAATTCC TCAAAGTCAA GGACTTTCTC TTACTCATCT GTGCGTCCTC AACATGTAGA 1260
CCAGTGCCTG AAGCAGAGCT GATGAGCAAT GGAGAATTGT TGAATGAATG GATGAGATTT 1320
GTACAGTATA GCTGCTAAGA GTTCAAGGTC TGTGTTCAGT GGAAGATTTG GTTTAAATAC 1380
CAGCTCTATG TGAACTTAAC CTGGAATTAG AAAACAAAAC AAAACAAAAA ACAAAAATAA 1440