EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-05297

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:161368550-161370580

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr1:161368758-161368779

GAAAGGAAAGAGAAAGAACTA

6.36

dbSUPER

Number of super-enhancer constituents: 13
ID	Coordinate	Tissue/cell

SE_15164	chr1:161367542-161370663	CD4_Memory_Primary_7pool
SE_16207	chr1:161368325-161370466	CD4_Naive_Primary_7pool
SE_20513	chr1:161367881-161370728	CD56
SE_21832	chr1:161368127-161370691	CD8_Naive_7pool
SE_22854	chr1:161367689-161370603	CD8_primiary
SE_24387	chr1:161368513-161370173	Colon_Crypt_2
SE_30216	chr1:161368260-161370692	Fetal_Muscle
SE_35091	chr1:161368151-161370881	HeLa
SE_40430	chr1:161367417-161370693	K562
SE_43362	chr1:161368283-161370606	Lung
SE_53079	chr1:161368307-161370650	Small_Intestine
SE_53950	chr1:161368266-161370606	Spleen
SE_65832	chr1:161368236-161370575	Pancreatic_islets

Enhancer Sequence

GGTCTGGAAC ACCCTGACCT CGTGATCCAC CCACCTCAGC CTCCCAAAGT GCTGGGATTA 60
CAGGCGTGAG CCACCGCGCC CAGCCCCATA TATCTTTTTT TTAATCAAGT GTCTGTTCAA 120
ATTGTTTGTC CTCCTTTTAG GAGAATTGTG AAAATCTTTT AATTAAAAAT GTACATTCTT 180
TCCACCTGAT TTAGAACCTA AAAATCTTGA AAGGAAAGAG AAAGAACTAA CATTTTCGTG 240
ACTGAGAACT GGATGGTGAC AAATGAGAAA ATAAACACAG TAAAGACAAG TTTGGGGGGG 300
TGACAGAGCA GAGCGAGTTG TGATCCCCGC TCCGTCACCA CGTTCGTTTC GTTCCTCTGG 360
ACTACTGAGT TAATGATACC GGCAATCAGC GCAAAGCGAG ATAATCACCA GCGCACTCTT 420
GGATCTGTAT ACAGGTTTGT AAACTATGTG GAGGAAACCG ACCCATCGCA GTCTCGGCCG 480
AAGAGGCCGG AGCCGGAGCC AGAGCCAGAG CCTGAGCAGG GTCTGAAAAA AGGACCGGCC 540
GTTCAGGACT AGGCCCTGAA CTACAACTTG CTCCTCAGGG GTCCGGGTCG GAAGTGACGA 600
CTTCATTCAC TGAGCAGCCA TTTCCGGTTC CCAGTGTGTC CGAAGTTCCT TCTGGGTGTC 660
AGAAAAGACA CAAAAACTGA CAGGGCGGAA CCGCGACACG GTGCCTGATG ATATCAAAAG 720
GTCTCACGGC TCCGGAGGGA CCCAGTCGCC CACAGCCGCC AGGGGCGCCG CCGGCTCCGA 780
GCCCGTTGTC GAGAGCCGCT CGGCTGCTGG GGTCTGCCCT TCAGTCCTTC CAACTCTCCT 840
CGGACCTAGA GTTCCGGGAT CTCACTGCGA TCTGGGCGAA TTCTTACGTA GAATTCGAAA 900
GGATATGGGG AAGGAAAAAA ACAAAAACGG GAACCACTTT GTTTCCGCCC GGTTTCGAAC 960
CGGGGACCTT TCGCGTGTGA GGCGAACGTG ATAACCACTA CACTACGGAA ACCAGGCGGT 1020
GGCAGGTTTT CCACAAATGA CTCTGAAAAG TCAGAGGCTC ACCACTGTGT CTCTGACCCA 1080
CGAGAAAAGT ACCCGGGCGG GCCACCCACA GCTTCGGGAT CGGGGCGCGC AGGGAAGTAG 1140
CCAGCAAAGC AGGTAAGTCC CGGGCTGCTC GCGGCGGGGT CATGACTGAG GGCACAGGGG 1200
TGAACTCCAT GGTGCTTCCT CAGGAAACTT CCGGCGCAGT CAGGGCTGCA GCCAGAGCCC 1260
GGAGATAGTT GGGCAGGGCT CCAGGCGTCC CCGAATGCTC GTCGTGGAGT TTTCCTGATC 1320
CTGTCGGGTC CCTAAGGAAC GCTTGGCGGG GAGCGTGGAC GCCCTGGGGC CAGGCCACCG 1380
CGGTCACTGA GAGCCACCCC CCCGGAAACT GGAGAAAAAC GGAGTAGAAG AGACCTAGGG 1440
GACAGACTTG GCCGGGTCAA GGGAAACCAG CTCATATTTG GAACAAAATA CGCCTTATGT 1500
TTGCCCAGCA CTGAATTTAG AAGCATTTTC ACATTCTCGA GTTTAACTAG TTTTGCAACA 1560
GTGCCACGAG CAAATTATTA AACGTGTTTT AAAGATGAAG AGACTGAAGC TAGGTAAATT 1620
GGACTTGGGT AAGATGGAAG CGCTACTTAA CGTTAAGGAG AGTCTGCGAC CCTGATGTTC 1680
TCAGGCTGTA TCTCGCTTAG TGGGACTACA CCTTATTATT GTCGGAGGAA ACAAATGAAG 1740
AGGAAAGAGA CCGTGAAGAG TATTCCTGGA GGGACTCAAG ATACCGCTGT AGGTAGAACC 1800
CCAAGATAGC TGTGTAGAGT GACAGCTGAT GTCGAATGAC TTCATCTTTT CCACTGCTGC 1860
GGGTGAAATT ATCTGAGGAG GTAGGAAGAG GAGATGGTTT AGGGATGCCA TATGACAAAA 1920
GCTTTGGAAA ATTAAGAAGA GGCCGGGCGC GGTGGCTCAT GCCTGTAATC CCAGCACTTT 1980
GGGAGTCCGA GGCGGGCGGA TCTCACCTAG GATCAGGAGT TCCAGACCAG 2030