EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-05288

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:161201260-161202590

Target genes

Number: 19
Name	Ensembl ID

TSTD1	ENSG00000215845
F11R	ENSG00000158769
USF1	ENSG00000158773
ARHGAP30	ENSG00000186517
PVRL4	ENSG00000143217
KLHDC9	ENSG00000162755
NIT1	ENSG00000158793
PFDN2	ENSG00000143256
DEDD	ENSG00000158796
UFC1	ENSG00000143222
RP11	ENSG00000224985
USP21	ENSG00000143258
PPOX	ENSG00000143224
B4GALT3	ENSG00000158850
NDUFS2	ENSG00000158864
APOA2	ENSG00000158874
TOMM40L	ENSG00000158882
NR1I3	ENSG00000143257
C1orf192	ENSG00000188931

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr1:161201776-161201789	TATTAATTAATTT	-	6.37
POU6F1	MA0628.1	chr1:161201777-161201787	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr1:161201777-161201787	ATTAATTAAT	-	6.02

Enhancer Sequence

GGAACTGTGG AAAGCAGGAA ACAAGGACAC TTTTCAATTT TTTTTTTTCT GAGACAGAGT 60
CTCACTGTCA CCCTGGCTGG AGTGCAGTGG CGTGATCTCT GCTCACTGTA ACCTCTGCCT 120
CCTGGGTTCA AGCAATTCTC CTGCCTCAGC CTCCCAAGTA GCTTGGATTA CAGGCGTGTG 180
CCACCATGCC TGGCTGATTT TTTGTATTTT TAGTAGAGAC GGGTTTTCAC CATGTTGGCC 240
AGGCTGGTCT CCAACTACTG ACCTCAGGTG ATCCACCTGC CTTGACCTCT CAAAGTGCTG 300
GGATTACAGG CATGAGCCAC TGCACCCGGC CCACTTTTTA ATTTTTTGTT TGTTTATATG 360
TTTTTATTTT TTGTAAAGAT GGAGTCTTAC TATGTTGCCC AGGGTGGTCT CGAACTCCTA 420
GGCTCAAGCA GTCCTCCTGC CTTGGCCTTC CAAAGTGCTG GGATTATAGG TGTGAGCCAC 480
TGTGCCCAGC CGACAAGGGC ACCTTATTAT TATTCTTATT AATTAATTTA TTTTTGAGAC 540
AGAGTGTTGC TCTGTCACCC AGGCTGGATG TAGTGGCCTG ATCTCGGCTA CAGCAAACCT 600
CCGCCTCCTG GGTTCAAGTG ATTCTTCTGC CTCAGCCTCC TGAGAAGCTG GGATTATAGG 660
CGCCCACCAC CACACCCAGC TAAGTTTTGT ATTTTTAGTA GAGACGGATT TCACCATGTT 720
GGCCAGGCTG GTCTCAAATT CCTGAGCTCA AGTGATCCAC CCACCTTGGC CTCTCAAAGT 780
GCTGGGATTA CAGGCATGAG CCACCGTGCC TGGCCTATTA TTATTATTTT TAGCTTTCAT 840
TTTTTGAGAC AGAGTCTCAC TCTGTCACCC AGGCTGGAAT GCAGCGGTGC TATCTGAGCT 900
CACTGCAGCC TCAACCTCCT GGGCTCAAGT GATCCTCCCA CTTCAGCTTC CTGAGTACCT 960
GGGACTACAG GCACCCACCA TCATGCCCAG CTAATTTTTG TATTTTTTGT AGAGTTGGGG 1020
TTTTGTCATG TTGCTGAGGC TGGTCTCAAA CTTCTGGACT CAAGCGATCT GCCAGCCTCC 1080
GCCTCCCAAA GTGCTGGGAT TACTAGTGTG AGCCACTGCG CGGCACCTCA AGGGCACTTT 1140
AGATGCAAGC CTGTACTTCA GAGATGGAGA AGAACTCCCA GTTCTGATTG GCACATTTAA 1200
AACCAAAGCT GGGAATTCAA GACCTAATGC TTGGAAAGGC TGACGCATGT GATAATTTGT 1260
AGTCAGTGAC TTTTCGGGGT GGATATACAA TTTACTGAAG TGTTTGCCTC CTGAAAGATG 1320
AGGGGAGGTC 1330