EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-05278

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:161136720-161136880

Target genes

Number: 24
Name	Ensembl ID

TSTD1	ENSG00000215845
F11R	ENSG00000158769
USF1	ENSG00000158773
ARHGAP30	ENSG00000186517
PVRL4	ENSG00000143217
KLHDC9	ENSG00000162755
NIT1	ENSG00000158793
PFDN2	ENSG00000143256
DEDD	ENSG00000158796
UFC1	ENSG00000143222
RP11	ENSG00000224985
USP21	ENSG00000143258
PPOX	ENSG00000143224
B4GALT3	ENSG00000158850
NDUFS2	ENSG00000158864
ADAMTS4	ENSG00000158859
FCER1G	ENSG00000158869
APOA2	ENSG00000158874
TOMM40L	ENSG00000158882
NR1I3	ENSG00000143257
MPZ	ENSG00000158887
SDHC	ENSG00000143252
C1orf192	ENSG00000188931
RRM2P2	ENSG00000236484

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs2301287

chr1

161136843

hg19

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_15215	chr1:161134109-161137811	CD4_Memory_Primary_7pool
SE_68071	chr1:161122630-161173567	TC32
SE_68072	chr1:161122630-161173567	TC32
SE_68073	chr1:161122630-161173567	TC32
SE_68074	chr1:161122630-161173567	TC32
SE_68075	chr1:161122630-161173567	TC32
SE_68076	chr1:161122630-161173567	TC32
SE_68077	chr1:161122630-161173567	TC32
SE_68078	chr1:161122630-161173567	TC32
SE_68079	chr1:161122630-161173567	TC32

Enhancer Sequence

TAAGGTGAGT GCTCCACTTG TGCCAGAGGG AGCTTCATTT AATGCTCTTC CCATTTCCAT 60
CAAAAGCTAG ATGGATCCTG GCCCTCTGAA TATGCCTCTT CCCCTCCCCT CCTGACCTCT 120
CGCCGGCGGC TACAGGCGGT GCTGCAGTGT CTCTCCCTCT 160