EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-05048

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:155763350-155764840

Target genes

Number: 28
Name	Ensembl ID

RP11	ENSG00000235919
ASH1L	ENSG00000116539
MSTO1	ENSG00000125459
DAP3	ENSG00000132676
YY1AP1	ENSG00000163374
GON4L	ENSG00000116580
SYT11	ENSG00000132718
RIT1	ENSG00000143622
SNORA42	ENSG00000207475
SCARNA4	ENSG00000252808
KIAA0907	ENSG00000132680
RXFP4	ENSG00000173080
ARHGEF2	ENSG00000116584
SSR2	ENSG00000163479
UBQLN4	ENSG00000160803
LAMTOR2	ENSG00000116586
RAB25	ENSG00000132698
MEX3A	ENSG00000254726
LMNA	ENSG00000160789
SEMA4A	ENSG00000196189
SLC25A44	ENSG00000160785
PMF1	ENSG00000160783
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
C1orf182	ENSG00000163467
CCT3	ENSG00000163468
MEF2D	ENSG00000116604

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXA1	MA0148.4	chr1:155764775-155764791	TACAAAGTAAACAAAG	+	6.49
FOXP2	MA0593.1	chr1:155764779-155764790	AAGTAAACAAA	+	6.62
Foxa2	MA0047.2	chr1:155764776-155764788	ACAAAGTAAACA	-	6.18
RUNX1	MA0002.2	chr1:155764304-155764315	TTCTGTGGTTT	+	6.32

Enhancer Sequence

AATTTCTTCA GGATGAAATG TATGTTTTCT ATGCTTGACA CACTAGCCAA TGATATAATT 60
TTTTTTTGAG TCAGGATCTC CCTCTGCCAC CAAGGCTGGA GTGCAGTGGC ACTATCATAG 120
TTTGCTGAAT CCTTGACCTC CTGGGCTGAA GCAATCCTCC TGCCTCAGCC TCCTGAGTAG 180
CTAGGACTAC AGGTACGTGC CAATACATTA GGCTAATTTC TTAAATTTTT AGTACAGACA 240
AAGTTTCTCT ATGTTGCCTA TGCCGGTCTC GAACTCCTAA GCTCAAGCAA TCTTCCTGCC 300
CCAGCCTCCC AAAGTGCTGG GATTACAGGT GTAAGCCACC ACTCCTAGCT CAATGATATA 360
ATTTTTTATA GAAATAACTC AAGCTAAGTT ATCATAATTG TTTTCCATAC CTCCAGTCTT 420
GTTCACTTTA CCTAACAAAT TAATACATTA AACTGGTATT AAATCAAAGT GATCTTTCTA 480
AAATCCAAAT CAGTTCCTAC TGATTTACTG CTTAAACCTC TTTTTTTTTT CAGGCGGAGC 540
CTTGCTCTGT CGCCCAGGCT GGAGTGCATT GGCGTGATCT CGGCTCACTG CAACCTCTCC 600
CGCCTGAGTT CAAGCAATTT TTCTGCCTCA GCCTCCGGAG TAGCTGGGAT TACAGGTGCC 660
TACTACCACG CCTGGCTAAT TTTTGTATTT TTAGTAGAGA CAGGGTTTCG CCATGTTGGC 720
CAGGCTGGTC TTGAACTCCT AACCTCAGGT GATCTGCCTG CCTCCACCTC CCAAAGTGCT 780
GGGATTACAG GCGTGAGCCA CCATGCCCGC CCTTAAACCT CATTTTGAGA GCTTAAAAAT 840
CCTCCATGAT GTAAACACTA CCTAATCTTA TCTACCACTT CTCTGTCTTT TCACTCATAC 900
ACCACCACCA AAGTACTTAG TATTTTCCAA ACATACTTTT TTGATGTTTT ACAATTCTGT 960
GGTTTGCAGA TGCTCTTCTA TTTGCAATAT TCCTCTCTGT CCCTATTCAC CAAATTTCTT 1020
ATTCCTCCTT CAAAACTAAG ATAAAAAGCC ATTTCATTCT GCAAATTCTT TCCTAAGTTC 1080
TCCTATCCTA GTCCATATCA TACACTAGGA GATGACACTC TCTTTTAGGT CATTATTATA 1140
CCTTATGTAA AACCTGTTAC AGCATTTATC ACTTTGTATT GTAACTTTTT CTGTTTCTAT 1200
CACCCTACTA GGCTGAACTC CTACAGCACA GATGCCATGT CTTATTCATC TTGCACAATC 1260
CCTGCCAAAC AGTAAGGACT GAATACACGA CTGTGGGATA TACAAATGAA TAACTGATGG 1320
GCTTTCTGAA TATGTACCTA AATTTAAAGA ATCAGATCAA TAAATGGGTA AAGGAAACCT 1380
AAATGTCTTA ACATGGATGA GCTGCAAACT TCACCCCTAA AAATCTACAA AGTAAACAAA 1440
GACAGCTGCA AAGCAGTCAA GAGCAGGACT TAGAATAAAC ACAGACTCAC 1490