EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-05002

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:154999730-155001280

Target genes

Number: 35
Name	Ensembl ID

KCNN3	ENSG00000143603
PMVK	ENSG00000163344
PBXIP1	ENSG00000163346
PYGO2	ENSG00000163348
SHC1	ENSG00000160691
CKS1B	ENSG00000173207
FLAD1	ENSG00000160688
LENEP	ENSG00000163352
ZBTB7B	ENSG00000160685
DCST2	ENSG00000163354
DCST1	ENSG00000163357
RP11	ENSG00000232093
ADAM15	ENSG00000143537
EFNA4	ENSG00000243364
EFNA3	ENSG00000143590
SLC50A1	ENSG00000169241
DPM3	ENSG00000179085
HMGN2P18	ENSG00000223452
TRIM46	ENSG00000163462
KRTCAP2	ENSG00000163463
MUC1	ENSG00000185499
MTX1	ENSG00000173171
THBS3	ENSG00000169231
MTX1P1	ENSG00000236675
GBA	ENSG00000177628
FAM189B	ENSG00000160767
SCAMP3	ENSG00000116521
HCN3	ENSG00000143630
CLK2	ENSG00000176444
FDPS	ENSG00000160752
RUSC1	ENSG00000160753
ASH1L	ENSG00000227773
MSTO1	ENSG00000125459
DAP3	ENSG00000132676
YY1AP1	ENSG00000163374

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:155000257-155000272	TGAACTCCTGACCTT	-	6.04
Nr2f6(var.2)	MA0728.1	chr1:155001132-155001147	GAGGTCAAGAGATCA	+	7.23
Nr5a2	MA0505.1	chr1:155001110-155001125	GAGGCCAAGGCCAGC	+	6.4

Enhancer Sequence

TGGTCTCAAA CTCCTGAGCT CAAGCAATCC GCCTGCCTTA GCCTCCCAAA GTGCTAGGAT 60
TACAGGTGTG AGCCACCGAG TAAGACCCCC AGAAACATTT ATTGGCTGAG CACTGACTGT 120
GTAGCAGACA CTTCGCCTGC CTTAGCCTCC CAAAGTGCTA GGATTACAGG TGTGAGCCAC 180
CGAGTAAGAC CCCCAGAAAC ATTTATTGGC TGAGCACTGA CTGTGTAGCA GACACTTAAC 240
CAAGTGCTTT ATTGTTTGTT TTGGGGTTTT GGTTTTTGTT TTTTAGGAGT TTTTTACTTC 300
TTTTTTTTTT TTTTTTTTTT TTTTGAGACA GGGTATCACT CTGTCACCCA GGCTGGAGTG 360
CAGTGGTGTG ATCTCGGCTC ACTGCAGCCT CTGCCTCCTG GGTTCAAGTG ATTCTTGAGC 420
CTCAGCCTCC CAAGTAGCTG GGATTATAGG TGCCCACCAC TATGCCTGGC TCATTTTTTT 480
GTATTTTTAG TAGAGACAAG GTTTCACCAT GTTGGCCATG CTGGTCTTGA ACTCCTGACC 540
TTAGGTGATC TGTCTGCCTC AGCCTCCCAA AGTGCTAGGA TTACAGGCGT GAGCCACCGC 600
ACCTGGCTCA CATTCTCAAT TAATGGCTTA CCAGGCACTC GACACACATA ATTTATTTTA 660
TTTTATTTTA TTTTATTATT ATTATTTTAG ACAGAGTTTC ACTCTTGTTG CCCAGGCTGG 720
AGTGCAGTGG CAGGATCTCG GCTCACTGCA ACCTCTGCCT CCCAGGTTCA AGTGATTTTC 780
CTGCCTCAGC CTCCCAAGTA GCTGGGATTA CAGGCACCTG CCACGACGCC TGGCTAATTT 840
TTTGTATTTT TAGTTGAGAT GGGGTTTCAT TATGTTGGCC AGCCTGGTCT CAAACTCCTG 900
ACTTCAGGTG ATCTACCCGC CTCATCCTCC TAAAGTGCTA GGATTACAGG CATGAGCCAC 960
CCGCCTGGCC CCAACACACA TAATCTAATT TATTCCTTAC AGTGACCCAG AGAGGTTGCT 1020
ACCATTATTA TTCCACTATT CAGATGAGGA AACTGGGCCA GGACAGTGGC TCACGCCTGT 1080
AATACCAACA CTTTGGAAGG CTGAGGTGGG TGGATCACCG GAGGTCAGGA GTTCGAGAGC 1140
AGCCTGAGCA ATATGGTTAA ACCCCGTCTC AACTAAAAAT ACAACTGGAC ATGGTGGCAT 1200
GTGCCTGTAG TCCCAGCTAC TTGGGAGGCT GAGACAGGAG AATTGCTTGA ACCCGGGAGG 1260
CAGAGATTGT AGTGAGCCAA GATTGCACCA CTGCACTCCA GCCTGGGTGA CAGAGTGAGA 1320
CTCCATCTCA AAAAAAAAGG CCAAGCATGG TGGCTCACAC CTGTAATCCC AGCACTTTGG 1380
GAGGCCAAGG CCAGCAGATC ATGAGGTCAA GAGATCAACA CCATCCTGGC CAACACAGTG 1440
AAACCCCATC TCTACTAAAA ATACAAAAAT AAGCTGGGCA TGGTGGCATG TGCCTGTAGT 1500
CCCAGCTACT CAGGAGGCTG AGGCAGGAGA ATCACTTAAA CCTGGGAGGC 1550