EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-04930

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:153748640-153748990

Target genes

Number: 21
Name	Ensembl ID

BX470102.3	ENSG00000238279
S100A6	ENSG00000197956
S100A5	ENSG00000196420
S100A3	ENSG00000188015
S100A4	ENSG00000196154
S100A16	ENSG00000188643
S100A1	ENSG00000160678
CHTOP	ENSG00000160679
S100A13	ENSG00000189171
SNAPIN	ENSG00000143553
ILF2	ENSG00000143621
RP11	ENSG00000235015
INTS3	ENSG00000143624
SLC27A3	ENSG00000143554
DENND4B	ENSG00000198837
CRTC2	ENSG00000160741
CREB3L4	ENSG00000143578
SLC39A1	ENSG00000143570
JTB	ENSG00000143543
RAB13	ENSG00000143545
RPS27	ENSG00000177954

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr1:153748684-153748698	AAGGGGGCGTGTCG	-	6.2
KLF16	MA0741.1	chr1:153748686-153748697	GGGGGCGTGTC	-	6.32
SP8	MA0747.1	chr1:153748685-153748697	AGGGGGCGTGTC	-	6.27

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_00397	chr1:153741293-153750753	Adipose_Nuclei
SE_01713	chr1:153742861-153751939	Aorta
SE_10027	chr1:153744441-153749538	CD14
SE_30420	chr1:153745008-153748837	Fetal_Muscle
SE_32051	chr1:153745324-153749251	Gastric
SE_40953	chr1:153741431-153749148	Left_Ventricle
SE_42308	chr1:153739733-153751166	Lung
SE_49075	chr1:153742379-153749501	Right_Atrium
SE_53886	chr1:153745283-153749090	Spleen

Enhancer Sequence

GTAAGGCTGG AGCTCCGAAC TGACTAAGGC GGGGCCAGCC ACAGAAGGGG GCGTGTCGGA 60
GACCACAGAA AGGCTTGGTC TCATCCCTGG GCCTGGGAAG AAGCCGACTA TCCCTTGGGG 120
TTCGAAAGTG GGTGGAGATA GGAGTCTCCG GGTTTGAGAA GGGATGAGGC TGAATCTTTG 180
GTGCCCCAAG GATCCCCAAG GAGTCGAGTT CCAGGCCTCA GACCCAAGAT GGAATGTCCA 240
TACCCTTCAC CCTCATCCAA GAGCAGTGTG GGCTGGGATA GGGAGGGGAC ATGGGTCATA 300
GGCTCTTCTA GGTAGAGCCA GGGCCCCGGC GTTGTGCTTT CCCACCCTTC 350