EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-04913

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:153537650-153537980

Target genes

Number: 18
Name	Ensembl ID

AL591704.5	ENSG00000237008
BX470102.3	ENSG00000238279
S100A6	ENSG00000197956
S100A5	ENSG00000196420
S100A3	ENSG00000188015
S100A4	ENSG00000196154
S100A2	ENSG00000196754
S100A16	ENSG00000188643
S100A14	ENSG00000189334
S100A1	ENSG00000160678
CHTOP	ENSG00000160679
S100A13	ENSG00000189171
SNAPIN	ENSG00000143553
ILF2	ENSG00000143621
NPR1	ENSG00000169418
RP11	ENSG00000235015
INTS3	ENSG00000143624
SLC27A3	ENSG00000143554

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_02493	chr1:153537674-153541738	Astrocytes
SE_27045	chr1:153535708-153541871	Esophagus
SE_34145	chr1:153537681-153541855	HCC1954
SE_34451	chr1:153535867-153542547	HCT-116
SE_34737	chr1:153535871-153542493	HeLa
SE_36040	chr1:153533581-153542335	HMEC
SE_38789	chr1:153537428-153542142	HUVEC
SE_43349	chr1:153537691-153541885	Lung
SE_45223	chr1:153537727-153541828	NHLF
SE_57543	chr1:153537787-153541191	VACO_503
SE_58034	chr1:153537814-153539879	VACO_9m
SE_63967	chr1:153537683-153541425	HSMM
SE_64375	chr1:153535710-153541858	NHEK
SE_68094	chr1:153505033-153542157	TC32

Enhancer Sequence

GGTGGTGGGC GCCTGCAGTC CCAGCTACTC GGGAGGCTGA GGCAGGAGAA TGGCGTGAAC 60
CTGGGAGGGG GAGTTTGCAG TGAGCTGAGA TCACACCACT GTACTCCAGC CTGGGCGACA 120
GAGCGAGACT CCATCTCAAA AAAAAAAAAA AAAAAAAAAA ACCCTTCAGT CAACACTTCA 180
GCACTTCACA GAGAGTTCTT CCAAGGGGGA AGGCCCAGAG AGGCCCAGGT TGATCCCACC 240
AGGGAAGCTG GAATGAGAGA ACTGTGGAGA CAAAGACAGA GACCCACGGG GATCCTCCCC 300
ACCCTGCCCT CAGCAGGACA GAGGTACTCA 330