EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-02892

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:54506510-54507180

Target genes

Number: 13
Name	Ensembl ID

YIPF1	ENSG00000058799
LRRC42	ENSG00000116212
HSPB11	ENSG00000081870
RP1	ENSG00000219102
AL353898.2	ENSG00000203276
TMEM59	ENSG00000116209
TCEANC2	ENSG00000116205
RP4	ENSG00000225183
AL353898.3	ENSG00000237611
AL161915.1	ENSG00000212670
AL357673.1	ENSG00000248835
MRPL37	ENSG00000116221
C1orf191	ENSG00000198711

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ALX3	MA0634.1	chr1:54506780-54506790	TCTAATTAAA	+	6.02
MEF2C	MA0497.1	chr1:54506966-54506981	GAAATAAAAATAGAA	+	6.18
PHOX2A	MA0713.1	chr1:54506777-54506788	TAATCTAATTA	+	6.32
PROP1	MA0715.1	chr1:54506777-54506788	TAATCTAATTA	+	6.14
Phox2b	MA0681.1	chr1:54506777-54506788	TAATCTAATTA	+	6.32

Enhancer Sequence

CTGCTGAAAT AGTAAGTATG AGTTTATTAT ATCCTATATT CCAAAAGCTA GTCTCACATG 60
ACTACTTCTA GATATATACA CTTTACAGAT ATCCAATTGT TTTTGTTTGT GTCATCTGAT 120
ACATTTTATA ATGTGTACCA GTTTCTCTAG CACATCAAAA CCAAATGAAT ATTCTATCAC 180
ATTATGAGTT TCCTGTTTTA TTTTCAAATT CTTATTGACA TTGATGCTTT CTGCTTAATT 240
ACATGTGAGC TTGGATTTGG TTTATTCTAA TCTAATTAAA GTTAAAGATG GTCTTATGTT 300
ATGTGCTATC ATTATCTACC CACTCCCACC CACCAAAATA ATTAGAAGGC TAATTAAATC 360
AGTATCTAAA ATAAGGTATG AGGAAATTTC ACAAGGTGAG TTCTGCTTTA GCTTGATGTT 420
TTATGTTCTT ATAAGTCAAA ATTCACTTCT AACATGGAAA TAAAAATAGA ATGGGGACTC 480
TCACTTTTGG CATTTTTCAT TATTTGATCA ATTTATTGGG AAATACCAGA ATATTTGATT 540
AGTTCATGCT CAAAACATCC TTTGAAGCAA ACTAAATGTT TTTAGAATAG TGATTTTCAA 600
AGTGTGGCCC CCAGGCCAGC AGCATCAGCA AAATCTGGAA CTTGTGAGAA ATACAAATTC 660
TCAGATCTTC 670