EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-02748

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:52454520-52456220

Target genes

Number: 12
Name	Ensembl ID

NRD1	ENSG00000078618
RAB3B	ENSG00000169213
RP11	ENSG00000223390
KTI12	ENSG00000198841
BTF3L4	ENSG00000134717
TXNDC12	ENSG00000117862
ZFYVE9	ENSG00000157077
RP4	ENSG00000228407
CC2D1B	ENSG00000154222
PLA2G12AP1	ENSG00000224680
ORC1	ENSG00000085840
PRPF38A	ENSG00000134748

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr1:52455458-52455469	GCTTCCCGCCC	-	6.02
RREB1	MA0073.1	chr1:52454916-52454936	TGTGTGTGTGTGTTTTGAGG	-	6.29
RREB1	MA0073.1	chr1:52454624-52454644	CCCCAACCCACCCACCTCCC	+	8.48
ZNF263	MA0528.1	chr1:52456085-52456106	CCCCTCCCTCGCTCCTCCCCC	-	6.69

Enhancer Sequence

GACTGGAGAT GCTTTTAGAT TTTTGCCTTT TCCCATACGG TTTCCTCTGA TAGGAACACA 60
CTTTCCTCCA CTGCTAGCTA AATCCTTCAT GACCAGGAAG GCTTCCCCAA CCCACCCACC 120
TCCCCCAAAA TGCTTCTTCT CTGGCTCCCA CAGGGCACCA GGGCTTTCCA CTTCTATAGA 180
TAGGGCCTTT CACGGCTTCC ATTGTCTTCC TCTGTTTATA GGCACAGAAC AGGTGGACAC 240
CCACCTGTGC GCGCGCACAC ACACACACAC ACACACACAC ACACATCCTC TCCTTTTACT 300
GTCTCCCACC CCTTTCCATC TGGATTCCAG GAAGCCGGGG GAAGAGGGCC CATCTTGTTT 360
TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTT TTGAGGGCCC 420
ATCTTTCTCC CACCTCCTCC ACATCTCTCT TAGCTTCCAA AGGCTGCTGC CCTGCCCTCC 480
CCAAAGTTGC TTCCATGCTT GGACTACAGA ACAGAGTTGG ATGACTTTTT CTGTCCACGA 540
TTCTCTTATT TTCTGTGATC CCCGGTGCCC GTGTAACAAG GTCCAGTGCC TGGGTCCCCT 600
CCTTGGACTC CTGAGTGGCC GAGACACCGC TAGTGCGTGG ACACCACTCC AGCCCCCATT 660
ACCTTTCCAC CCTTACACCA CGACCCACAC CTGGCCTCCT CCCCAGGCTG ACCCAGCGCC 720
CCACCACCCT ATCTATACAC TCCAAGTTCT CCCACGATTC CTCCACTTGC AGCCGCCAGA 780
CCCTACTCTA TTCCAGAGCC TCCTCTCCAC TCCTGACCAG AATGTAGGCC CCTGTGTCCA 840
TTTCCAAGGC CACTTCCCTG TGTCTCCACC GGCTCCCTGC CCCCTTCCTC TGCAGCAGGG 900
TAGACCCAAC CTGGCCTCTC ACCCTTCCAT TCTCCCAAGC TTCCCGCCCC CAAGCCCCAC 960
CCCTCGTCTT CCATCTACAG TTACCCCCAC GCCGGTCCCC AGCCGGGCTC AACCTCCGAC 1020
CCCAGCTATC CATACCCACA TCCCCCATAA ATGACCCTCT TTCGACCAGA CACTGCCCTG 1080
CTGCCTTTCT CCTTCCCAGC TATCCATACC CACATCCCCA CCCCCGACCC TCTCCCAACC 1140
AGACACTCCC CAGCTGCCCA GCGCCCCTTG CCCTCGGCAC CTCAGTCCCC TCCAGCTCCA 1200
AACGACCCCC GCCCAGCCAG TCCCCTCCCC TCAGCTCCTC ACCTCCATGC CTCCCCCCGC 1260
ACCCCCGCTC TAGCTCCCCT CAGTCCGCTC CCTTCACCGC CCCCTTCGCT GCCCCTCGGC 1320
TGCCCGGTAC CACCTTTCCG CACAGCCCCA CTCCGCCCTC CTCGCAGCTC CCCCGCCCCC 1380
CACGCCCCCG TTTCCCCCAG CGATCCCTCA CTGCCCTCCA GTTGCCCCCC ATCTCTCCTC 1440
CCAGCCCCAG CGCCGTCTTT CTTGCTCCCC TCCCGCCCTT GGAGCTCCCC CGGCTGCCCC 1500
CAACGTCTGG GAGACCCCCT CGGCGCCCCC TCCCTAGGTG AGCCCCACCT CTGCCGCCGC 1560
GGAGCCCCCT CCCTCGCTCC TCCCCCGGCT TCCTTCCGCT GCCCCGCGCT CCTTCTCGGC 1620
GCCCGCTCTC GGTGCCCAGC GCCCCGCGCC GGGGATCGGT CCCTGATCCT CCGCGGGCGG 1680
GCTGCCGGGG CCGCGCCCCT 1700