| Tag | Content |
|---|
EnhancerAtlas ID | HS105-02565 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr1:45118280-45118910 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr1:45118707-45118726 | CACTGCCACCTGTTGGCCA | - | 7.06 | | NEUROD2 | MA0668.1 | chr1:45118607-45118617 | GCCATATGGT | + | 6.02 | | Znf423 | MA0116.1 | chr1:45118595-45118610 | GCCACCCTGGGGGCC | - | 7.52 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_03549 | chr1:45117728-45118587 | Brain_Angular_Gyrus | | SE_04577 | chr1:45117474-45119476 | Brain_Anterior_Caudate | | SE_04765 | chr1:45105519-45119634 | Brain_Cingulate_Gyrus | | SE_05770 | chr1:45105473-45119893 | Brain_Hippocampus_Middle | | SE_06677 | chr1:45117449-45119563 | Brain_Hippocampus_Middle_150 | | SE_07718 | chr1:45105641-45119708 | Brain_Inferior_Temporal_Lobe | | SE_08966 | chr1:45118171-45118407 | Brain_Mid_Frontal_Lobe |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH01I044653 | chr1 | 45117729 | 45118587 | | GH01I044652 | chr1 | 45118641 | 45118810 |
|
Enhancer Sequence | AGCACAGACA AGTCCCCCTT GGAGCCCAGC AAAGGCCCTT CACAGCTCCA CGCCCAGTTT 60
GATGGCACCC AATATCCTGA ACACAGGGAT CCTGGGGATG TACACAGCCT CTGTCGAGGC 120
GGGTGGAACA GCTCCAGCGA TGGCTGAGGG TTTGGGAAAG AAACAGGTTT GGAAGAGAAG 180
AGTGGGTAGG TGAGGGCAAC GGAGAGATGA AGAGGAGGCT CTTAATGCCC AGTTCCTGTC 240
AGGCCGACTT CTTTGATGTC TTTAGTCTCC CCTCCCACAA GCTTGGACTC AGTAGGTCCT 300
TGATGGCTGG TTACTGCCAC CCTGGGGGCC ATATGGTCTC TAAAAGGGGC CATTAACCCA 360
GAGTGAGGGC ATTCCACTGA AGCCCGCCCT GCTGTGGGAG CCTTGAGCTG TCTCATGGCA 420
CAGGCTGCAC TGCCACCTGT TGGCCATGGC TAGGAATGCA GCCACACAGC ATGGGAATCC 480
CTGCCACCAT AGTGGGGACT CACCAAGGAC TGATGGGATG CAGACAGAAC GCGGCTCTGG 540
GGACAAAGGA TCCATCATCC CCAAGAGTCA GCTCCCATCC AGAGCTTTTC TAGCCATCTC 600
CTTCACTGCC CCCTAAGCCC CGTGATCACC 630
|
