EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-02405

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:42208900-42209620

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1	MA0499.1	chr1:42209231-42209244	GGGAACAGCTGCC	-	6.24
REST	MA0138.2	chr1:42209057-42209078	CCCAGCACTTAGGACAGAGCC	+	6.8

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_55826	chr1:42200960-42212222	u87
SE_58855	chr1:42183908-42232258	Ly3
SE_59661	chr1:42184495-42243258	Ly4
SE_60947	chr1:42191792-42231614	DHL6
SE_61131	chr1:42184395-42232186	HBL1
SE_67800	chr1:42200960-42212222	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I041738

chr1

42203673

42209728

Enhancer Sequence

TCAAAATACT AACTGCACCC CTAGTGAGAA CTCCTGTGAA AAGGGCCTCA GCAGGGCCTG 60
GTACAAGGTA GACACCCACC AACTGTGAGC TTGCCACCAC GTAAGCTTTG TAAGTAAAGG 120
AAAGAACCTT GTCTGTCTCT TTCAGTGCTA CCAAATCCCC AGCACTTAGG ACAGAGCCTG 180
ACATCTGGCA GACACTAGGT GAATGAATGA ATGAATGAAT GTTACATGTT CAGTCAATGA 240
CTGGTGAGTA GCTGTTTGGT GAAACATGTC AAATTTAATC ACTACTAGTG TTTGCTATGC 300
AGCTCCAAAC CACAGGATAA GGAGATGGTG GGGGAACAGC TGCCCCTTTC TGAATGTCCC 360
GTCCTATCCT TCCTTCAAGG CCTGAGACCC CTGGAGATGA CGCTCAGGGA CTCGTCATTT 420
GTCCTTCACT GGTGAATACT ATCTGACTCA TAAAAGCTTC TCTCTTCTCC ATGACTAGAA 480
TGTGGGGGTA GGATCTGCCT CTCTTCCCTC TCTGGTCCTG GGTATAGGGG ACTTGGTCCC 540
TAGCAGGCTC AGTAGACTTG TGAGTGGTTG CATTGAATGC CGGCCATCAG GCACCTTTGC 600
GTAAATGTGG GCAAACCTGG TCAAGCAGAG TAATTGGGAA ATGGAAGGGA AATGGGGGAG 660
GGAGGGACTC CCTGGATATT CTGAGAAGAG GATTCACCAG AAATCTCGAT TTCTACCCGT 720