EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-01963

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:32798350-32798610

Target genes

Number: 15
Name	Ensembl ID

KPNA6	ENSG00000025800
RP4	ENSG00000250135
TXLNA	ENSG00000084652
CCDC28B	ENSG00000160050
IQCC	ENSG00000160051
DCDC2B	ENSG00000222046
EIF3I	ENSG00000084623
TMEM234	ENSG00000160055
MTMR9LP	ENSG00000220785
FAM167B	ENSG00000183615
HDAC1	ENSG00000116478
MARCKSL1	ENSG00000175130
TSSK3	ENSG00000162526
BSDC1	ENSG00000160058
LRRC37A12P	ENSG00000229259

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1

MA0499.1

chr1:32798430-32798443

AGGGACAGCTGGT

6.12

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_03634	chr1:32797793-32798617	Brain_Angular_Gyrus
SE_04560	chr1:32796897-32801287	Brain_Anterior_Caudate
SE_05286	chr1:32796313-32808078	Brain_Cingulate_Gyrus
SE_06553	chr1:32796063-32808370	Brain_Hippocampus_Middle
SE_07102	chr1:32797173-32807986	Brain_Hippocampus_Middle_150
SE_08363	chr1:32796858-32801343	Brain_Inferior_Temporal_Lobe
SE_24672	chr1:32798213-32798706	Colon_Crypt_2

Enhancer Sequence

GTGAGGAAGG AGCTGCCTGT GGCCATCTCC CTGGCATTGG AGCACCAGCC CCTTTGTCCC 60
ACCACTCTGA GGAAAGGCAC AGGGACAGCT GGTCCAGCTT ACAAAGGCCT CTTTCAGGGA 120
CCAGTCTGTC CAGCTCTGCA GTTCTAGGCA GAGCTAGGAG CCCCAGCCCC CAGTAGTCAC 180
CTAGGATCCT GTGGAAGTCA CTGTCTGCAC TTTTGCCCTG AGGCTCTGGG CTGGGTCATC 240
TCATGCCAGT CTCTGCTCTC 260