EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-01949

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:32646120-32646840

Target genes

Number: 19
Name	Ensembl ID

PEF1	ENSG00000162517
RP11	ENSG00000254545
PTP4A2	ENSG00000184007
KHDRBS1	ENSG00000121774
TMEM39B	ENSG00000121775
KPNA6	ENSG00000025800
RP4	ENSG00000250135
TXLNA	ENSG00000084652
CCDC28B	ENSG00000160050
IQCC	ENSG00000160051
DCDC2B	ENSG00000222046
EIF3I	ENSG00000084623
TMEM234	ENSG00000160055
MTMR9LP	ENSG00000220785
FAM167B	ENSG00000183615
HDAC1	ENSG00000116478
MARCKSL1	ENSG00000175130
TSSK3	ENSG00000162526
BSDC1	ENSG00000160058

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXP1	MA0481.2	chr1:32646592-32646604	AAGTAAACAGAC	+	6.52
FOXP2	MA0593.1	chr1:32646592-32646603	AAGTAAACAGA	+	6.32
Zfx	MA0146.2	chr1:32646185-32646199	CAGGCCGAGGCCAG	-	6.07

Enhancer Sequence

TGCCAGCTCT GCGTTGCCAG CGGGCAGGGG GAGGAGCTGT GGGGTCGGCC TCGCTTCTGG 60
ACTTACAGGC CGAGGCCAGG TTGTCCGGGA GGAGGAGATG TAGAATGAGA GGACAGTGCT 120
GGGGGCCGCG GTCCCCCCTG CGCTCTGGCG AGTTGGCGGA GCTGCCCCCT CTAAGCACAG 180
GAACAGAGTT CTGGAGAGAA GCTCCGACGG GATTAAGTCA GGTGGCAGCC AAACGAGGCA 240
CCCAGTCAGG AAATCCAGGT CCCGTTAGAA ACACCTCAGC CACCAGCAGC TAACTGCCCT 300
TCCTGTTTGA GGCATTTCTA GAATGATCTG AATGGCAAGA AATGGTTTTG TGGGGGGGAA 360
GGAGATGGAC TAGAAGTTGC TCCGTGCCAT CCCTGTGTGC TGATGCTTTA CATACTTTTA 420
TGATCTAACA AATATGTTCG GGTGGTAGTG AGAAATAGTT GTGTCATTTT ACAAGTAAAC 480
AGACTTAAAG AAGTTAGGCA ACGATTACTA TAATTTCTTG ATTTAAAAGA TGTTTCGAAT 540
CTAAATTCTG ACAGGAACTA GATTTGCTGA ATGATACTCC ATTCTTGCTT CTCAGTTTCC 600
ATAAAAAAAA AAGTTAGGCA ACATTTAACT CAAACTGATG AGTTTGGCTG GGCCTGAAAA 660
ATCCCAACCA GTGGTATAAT CGTCTTCTTT CTCACTCTAC CCCTCATCCT CTCCTGCTGT 720