EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-01918

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:32264200-32265000

Target genes

Number: 20
Name	Ensembl ID

SNRNP40	ENSG00000060688
ZCCHC17	ENSG00000121766
FABP3	ENSG00000121769
SERINC2	ENSG00000168528
RP11	ENSG00000215899
TINAGL1	ENSG00000142910
HCRTR1	ENSG00000121764
PEF1	ENSG00000162517
COL16A1	ENSG00000084636
BAI2	ENSG00000121753
SPOCD1	ENSG00000134668
AL136115.1	ENSG00000212673
RP4	ENSG00000228634
PTP4A2	ENSG00000184007
KHDRBS1	ENSG00000121774
TMEM39B	ENSG00000121775
KPNA6	ENSG00000025800
TXLNA	ENSG00000084652
CCDC28B	ENSG00000160050
MARCKSL1	ENSG00000175130

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_06386	chr1:32264890-32267099	Brain_Hippocampus_Middle
SE_68353	chr1:32211370-32269289	TC32

Enhancer Sequence

GGCTGTGGAG GCCAGGGCAG GGCGGGGGCA CTGAGCCCAG GAGGCTCTCC AGGCACTTAG 60
TCCCAGAGGG AGGCAGCTGG GTGGGCGGCA GGGTCTGGGC CAACTTGTTC CTGTCGTGGG 120
TGTTTCCCTG CAGGAACCTA CTTATTCTCA CCCCAACTCC GTGAGGAGGA AATAGGATCA 180
TTCTCCTTTT ATGGATGGGG TTACTGGGGC TCAGGGAAAA TAAGAGGCTT ACTCACAACT 240
GTGTAATTAG TGGCAAAAGC AAGATTTGAA ACTCGACTGT CTGACTCACC AGCCTGTGCC 300
CCGTCTCTGG CTCACGGGAT GTGTGGAGGG GAGGAAGCCG GGGTCAGGTC AGAGTAAGGC 360
AGGAGTCAGG GGGAGAGAAT GGAGCCCTGG CCCTCGGTGT CATCTGTCAT TGACTTGCTG 420
TGTGGCCTTT GCAAAGTCCA ACCCTCTCTG AGCCTTGGTC TCCCCATCAG CAAATGACAG 480
CTCTGGGCTC AGATCTCTGA GCCGCTCCCA GCACACACTC TACGTGAAAG CATTTGCTGC 540
GGGTGACATT GATGTGGATG GACCTGAGCC GAGGCTGAGA GCTGCAGCAG CTAAGTGGGG 600
AAGCACAGCC TTAAAGCCAG AGAGACCCAG CTTCAAATTT CAGCTCTCCA CTGGCTCTTG 660
GTATGGGCAA GGGACCTGGC ACAGCTACCA AATGGGGTTA GCCAGACACC CAGAAGCCCT 720
TAGAACATGG CAGGGCCCCG GAGGCGGGGG CATGTGAGGG CGGCCCTTGG GATGTCAGGG 780
GAGTGGGGAG CAAGGCCTCA 800