| Tag | Content |
|---|
EnhancerAtlas ID | HS105-01585 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr1:27179360-27180120 |
Target genes | | Number: 19 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr1:27179753-27179772 | CTGACACCAGGGGGCACCA | + | 6.89 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_23384 | chr1:27179734-27183526 | Colon_Crypt_1 | | SE_24351 | chr1:27179889-27180833 | Colon_Crypt_2 | | SE_26621 | chr1:27173970-27186608 | Esophagus | | SE_33637 | chr1:27179787-27186622 | H2171 | | SE_34025 | chr1:27179331-27180866 | HCC1954 | | SE_34526 | chr1:27179715-27180968 | HCT-116 | | SE_57686 | chr1:27180033-27180802 | VACO_503 | | SE_64263 | chr1:27179011-27191692 | NHEK | | SE_67095 | chr1:27179787-27186622 | H2171 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I026852 | chr1 | 27178686 | 27182352 |
|
Enhancer Sequence | GTGAGCGGGG TGCGGAAGAG GGGTAACAGG GCCATGCCTG GCCAGTGATC AAAGTGTTCC 60
TGGATATCAG CCGACCTCCC CCTACACCCT AGATGCCCTC CGTCCACTAC CCCCTGGAGG 120
GCATTTGTCA TGTGACGGAA TTCCATGGAG AATTGTTATT TAATCACGTG CTCATTGTAG 180
AAAAAAAAAA TTAAGTACAA AACGTAAAAC AGAGGAGCAT TGGATATGAC ATGTAATTCT 240
ACTCCCCGGG GGTAGCCACC ATGACTGTTT CAGCCATGTT TGAATGACAC TGCCCTTCCG 300
GTTGCCCACT GCCTGGACTG GGTGGCGACT CCATCCTCTC CTGGCAGTAG GAACCCTGGG 360
GACTCAGCCC TGCTGGGTCA CTCCCTGTTC ATCCTGACAC CAGGGGGCAC CAGAGTTCCA 420
GAACGGGGAT TACATTGCTG TGGGTACTGC TAAGACAAGT CATTCCCACA CAGTCATGTC 480
ACCTACCCCA CCCAGTATCC CTGTCACCCA GCCTGCCTAG AGGGGAAGGG AACATAGGAA 540
TTTCATAGTC ATCAAATACC TATTCATCCT TGCTTTCCTC CCTCACCTGC AGCCTGGCTT 600
CTTGGCAGCC AGACAGGTGG GCCAGTTGGA ATTAATAGTG AATAAATTCT GTGGCCAAAA 660
GCCAGGTGGC CAGAGGGCAG AGAGAGGCCT GCCAGAGGTA AGAGTCTTGG GCCCCCAGAT 720
GGGCAGCAGC TCTCCTTTCC TCAGCCTTTC TCAGCCTGGG 760
|
