EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-01366

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:24434560-24434960

Target genes

Number: 10
Name	Ensembl ID

ID3	ENSG00000117318
RPL11	ENSG00000142676
TCEB3	ENSG00000011007
PITHD1	ENSG00000057757
LYPLA2	ENSG00000011009
GALE	ENSG00000117308
HMGCL	ENSG00000117305
RP11	ENSG00000229106
PNRC2	ENSG00000189266
MYOM3	ENSG00000142661

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_27677	chr1:24424566-24436755	Fetal_Intestine
SE_28574	chr1:24424526-24439807	Fetal_Intestine_Large
SE_30016	chr1:24433539-24439527	Fetal_Muscle
SE_40929	chr1:24433237-24439557	Left_Ventricle
SE_49006	chr1:24433953-24435974	Right_Atrium
SE_49734	chr1:24434371-24435896	Right_Ventricle
SE_51642	chr1:24433834-24439748	Skeletal_Muscle
SE_56931	chr1:24434806-24435532	VACO_400

Enhancer Sequence

TCGCTGCTCC CAGAAGGAGG GGAGTAAATG GCTCTTGCAG GATTGGCTGG GGGCTCCCTG 60
AGATTAGGGC TGCATCTGCC CACCTCAGCC TCAGGGCACC AGCAGGCAGG GCTGTGCCTC 120
CCTCCTCATA CTGGGGTCTC AGAAAGCAAG GCTGCATCCC CCCGACCCTG AATGTGCTTC 180
CCTCCTCAAA CAGGGTTTCC AGAGGACAGG GCTGTGCCTC TTCCATCACA TGGGGGTCTC 240
CAGAGAGCCA ATTGTGTCTC CCCCCTCAGA CAGGGGGTTC AGAAAGCAGG GATGTCCCTC 300
CCCCCATCAG GTTGGAGCCT CCAGAGGGCT AGGCTGGGCC TCCCTCCTCA GACTGGGGGC 360
CCTGGGAACA GGGCAGTGGC TGGGCGGGGA CCCTGTGGCT 400