Tag | Content |
---|
EnhancerAtlas ID | HS105-00976 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr1:17895320-17897040 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
REST | MA0138.2 | chr1:17896519-17896540 | GGAGCTGTCCTGGGTGCAGGC | - | 7.07 | ZNF263 | MA0528.1 | chr1:17895374-17895395 | CCTCCCTGCTCTCCCTCCCCC | - | 7.68 |
|
| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_00612 | chr1:17885040-17898127 | Adipose_Nuclei | SE_01537 | chr1:17887238-17903710 | Aorta | SE_03096 | chr1:17894836-17897293 | Bladder | SE_06186 | chr1:17884729-17903611 | Brain_Hippocampus_Middle | SE_23081 | chr1:17894994-17898004 | Colon_Crypt_1 | SE_23747 | chr1:17895586-17898000 | Colon_Crypt_2 | SE_24767 | chr1:17895440-17896896 | Colon_Crypt_3 | SE_26139 | chr1:17893912-17897509 | Duodenum_Smooth_Muscle | SE_26573 | chr1:17889896-17898099 | Esophagus | SE_28131 | chr1:17895406-17896604 | Fetal_Intestine | SE_29073 | chr1:17895366-17896616 | Fetal_Intestine_Large | SE_31687 | chr1:17894075-17897582 | Gastric | SE_34117 | chr1:17894944-17897531 | HCC1954 | SE_40808 | chr1:17894012-17898190 | Left_Ventricle | SE_43031 | chr1:17890076-17897872 | Lung | SE_46963 | chr1:17894194-17897822 | Ovary | SE_47562 | chr1:17895380-17897212 | Pancreas | SE_50079 | chr1:17894046-17898025 | Sigmoid_Colon | SE_52601 | chr1:17894207-17897494 | Small_Intestine | SE_54767 | chr1:17885171-17898261 | Stomach_Smooth_Muscle | SE_57000 | chr1:17894996-17897983 | VACO_400 | SE_57435 | chr1:17895275-17896682 | VACO_503 | SE_65277 | chr1:17894892-17897819 | Pancreatic_islets | SE_68684 | chr1:17894864-17898084 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I017567 | chr1 | 17893806 | 17897918 |
|
Enhancer Sequence | TTCAACTCAG GACAACAGGA CTCAGGGCAA ATCCTTTTAA TGATTGAAGC CATCCCTCCC 60 TGCTCTCCCT CCCCCAACAC CTCCAGCCCA GTCTTCCCTG TCCCCTTCCC ACAGCCCCAG 120 TCCGCATCTT CTCAGATTGT GAAGTTAATT GCAAGGGAGT GGGATGGACC CATTGGCCTG 180 ATCCTGATGG ATCTTTCCAG TCACAGCTGA AAGACCTTGG GTCTAATCAT GGATCCACCT 240 TTGATCAGAT TCTTGGCTTT GAACAAATCT CTCTCCCTCT CTGAGCCTCA GTTTCCTCCT 300 CTGTAAAACA GGGTCAGGTA CCTGCCATTC GTGGGTTGGC TCTGCCCCTG GAGGAACTGG 360 TGGGAGGATT AGGGGAGGCA CCAGGCATCC CCTGGCCTGG AGCAGTGCTC AGAGCCAACT 420 CCCGCCAGAG GTGCCCCAGA ACAGCTGGAA CTGCACTCAC ACCCTTATCT GGGGAGGACA 480 GCACATCACT GAGGGGTGTG GTTTGAATCA TAAGTGCTGG CTGCTCTGAA TTCAGCCAGA 540 GCTATCCTGG GCTGTGTGGC TGAGGGCCCC CGGGGGTCCT GGGGCTCCAT GCTGGGCTTG 600 CATTTCAGGA GACCTCAGAT GCTGCTGGCC TGCTTGCCCT GCCGTTGTTG GGTGGGTTGA 660 GCTGTTTTTA GCTCTAAGCT TTGCAAAGGC TGTTTCTTTC CTGCCCAGAG CTCCCTCGTG 720 GGACAGAGTG AACAGGCCCC TCCCTGCCAG ACAGAGATTG GGCCTGAAGA AAGAGCTTGG 780 AGCCAGATGG GACCCTGTGG GCTTTGAAAG GGAGGCCTGG TTTGCTCTCT GTGGCCTGCC 840 AACCTGGGAC ACCGGTGCCC AGCCTTGCTC CTTCCCTGGG AAACTGAATA GACGCCAGGG 900 TCTCACACCT GCCCCGTGGG AAAGGCTGGG GTATGTGCCT GCCTGGTGAC GGTGGCAGCC 960 GCGGAGGCTC GCGGATCCTG TCCCCTTTGC CGGCCACATG CTTCTGACTC ATCAGAGGAA 1020 GAATGTGGTC TTTTTGGGAG AGAGTTTTTA AAAATAGTCC AAGTCCTCCT CTGGCCCTGT 1080 CCCACTCCTC CCCTTCTGAC CATTTCCTGG CATCAGCCCC AGACCTCTTT CCACTCTGGT 1140 TTTGGGGAAC TGCCCCTTTG CAACTTGGCT GTGAATCTGT TTGTGAACCT TACTGGGGAG 1200 GAGCTGTCCT GGGTGCAGGC TGGTTTCAGA AGGGAGGGGC CCAGCTGTGG CCGCCTCCTC 1260 CCCAGGGGCC CGACTTGGGA CGAGGGATTT CTGCATTCCT TTGGCAACTG TGCCTTGGGT 1320 CGCCTGTGTG TCAGGCCTGT GCCATGGGTG CAGATAAGAG CGGTGAACAG TGGTCACAGT 1380 CCTGCCTTCA TGGAGTCCAC ATTCTCATAG GAGGAAACTG ATAAATAACT AAAATTTGTA 1440 GTTGCCAGAG GTGTTAAATC CTGTGAGGAT GGGGACACTG GGTCAGGGCA TGTGTGTGGG 1500 CTGTCAGGAG AAGGCCTCTG ATACAGCGAC CTTGGAGCAG AGCCCTGAAG GTGAGGGCAG 1560 CAGTGTGTGG GTATCTGGGG GAACAGCATT TCAGGCAGTG GGAACAGCAA GTGCAAAGGC 1620 CCTGAGGCAG AAACATGCTT GGGGCATTCA GGGAGCTGGA AGGTGGTGGT GACTAGAGTG 1680 AGCTGTGTGG AGAGAGGTAG GACATGAAGT CGGGGGGGTT 1720
|