EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-00718

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:12556180-12557550

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

STAT1

MA0137.3

chr1:12556742-12556753

TTTCTAGGAAA

6.14

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_00009	chr1:12555946-12557524	Adipose_Nuclei
SE_01743	chr1:12555539-12557934	Aorta
SE_15154	chr1:12553585-12557831	CD4_Memory_Primary_7pool
SE_28215	chr1:12555763-12557684	Fetal_Intestine
SE_39882	chr1:12555412-12558024	K562
SE_41209	chr1:12555364-12557258	Left_Ventricle
SE_41810	chr1:12556272-12556638	LNCaP
SE_42647	chr1:12555666-12557328	Lung
SE_49026	chr1:12555574-12557428	Right_Atrium
SE_54847	chr1:12554319-12557789	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I012495

chr1

12555443

12557768

Enhancer Sequence

TCTTTCCCTT AGTGCAGATC ATTGAAACTT CTATAAAGTC TCTGTAATAC CCTTAGAGAG 60
TACAATTAAT AGTACTGAAG ACGTCCTTAT AACTGAACTT TTGTAAAATT ATTGCTGGAT 120
TTTTGTCTTT CCAGCACACA TTAAACCTCA CCAAGGTATG GGGCTGTCCT TCAGATGTCA 180
CAGCCTGATG AACTGAGTGC TGACCTGGCT TTGGGAGCAC TTTTCAGTTA TCCCAGCTGT 240
GCATGGCCCA TTGCATGGCC TGTGACAATT TTCTGGGGTT GTTTCTGTCC ATATTTCCAA 300
CCTGACTTGC CCACCAGGGC ACTTTCTGCC CTTGTAAGTA AATCTCTATG CTGCTTACTG 360
TTAGTTCCTG TTTCTGAAGT GCTGATTCGA TGTGTAAGGC TTCTCCTCTC TTTTAGATCT 420
GTCTAGAGAG GAGTGTTTTG CTTCAGTGAG CTCCAGGAAC AAATAATAAG TACAGCAAGT 480
ACAAGGCCGA GGACAGACCC AGTGCACTCT TATCAGTCAT CTGAAATATG CACAGCCTTT 540
CCAAGACAAA TGTGCACTCC TGTTTCTAGG AAAACACCAG AAAGTACTTA CCAATTACCC 600
TGTATATGCT GTGTGGAAAA AGACAACATC AGCCTACCCT GAAAGCCATA ACAAAGCAGA 660
TTCCTCCGGG CCGCCGACAG CTGAGTGGCC CGAGTTAGAG CCTCTGCAGA ATCCCAGCCT 720
GTGGCCTGGG CCAGGTCCAG GTCCAGGTCC AGGTCCAGGT CCAGGTCCAG GTCCAGGGGG 780
CATTCTTCCC CTCGCATGAT TACCACGTCC CTCACCCTTT GCCCAAGGAA CTGACCTCAT 840
CTTAGAAGAA GTCTCAAGGG TTGGTGTGTT CTTACTAAGT GCCCAGGATT TTCTTCCAGA 900
CCCATCACAA ATCCAAAGAT GGCTCTCCTG AAGAGAGGCC TAAAAAAGAG GGTGCGGCCC 960
AGGGGGATCT ATTATAGTAA TAACCGCAGG AACGAGAGCC GCCGCTGGTG GGCAGCTCAC 1020
CATCCGCCAG GAGCAGGCTT GGCGGGCACT GTTTTATTTG GTCTTCACAG CAGTCCTCTA 1080
AGGTAGGTGT CATCGTCCTG TTTCAGAGAG AAAACGGAAA CTGAGGGTTA AGGAAGGTAA 1140
CCAACTTATC CATGATCACA TGGCCAGAAA ATGGTAGAGG CAGGATTCAA AGTCAAATGA 1200
GGGTCTTTAA CCGCTATTTC ATGGTGTATT CACAGGCAGT ACTGTAGGTT AATTCTGTTC 1260
ACTAAATGTA AAGTATGTCT CGTATTACAG AGTGCTTTTG TCTTAGTGAG AAAGGAAAAT 1320
CATTTTAACC TGCACACTTA ACCTCTTGGC TTTATGTCCA TTTACCCATC 1370