| Tag | Content |
|---|
EnhancerAtlas ID | HS105-00394 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr1:8476850-8478300 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXA1 | MA0148.4 | chr1:8477190-8477206 | AATTGTTTATTTAAGG | - | 6.15 | | Foxq1 | MA0040.1 | chr1:8477190-8477201 | AATTGTTTATT | + | 6.02 | | Pou2f3 | MA0627.1 | chr1:8477353-8477369 | GTCTATGCAAATGACA | + | 6.09 |
|
| | Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
| SE_00045 | chr1:8465614-8485937 | Adipose_Nuclei | | SE_02022 | chr1:8477510-8478261 | Aorta | | SE_07921 | chr1:8477474-8483841 | Brain_Inferior_Temporal_Lobe | | SE_11329 | chr1:8474464-8493359 | CD20 | | SE_18764 | chr1:8477368-8486022 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_25808 | chr1:8476636-8485754 | Duodenum_Smooth_Muscle | | SE_27457 | chr1:8477725-8478732 | Esophagus | | SE_28078 | chr1:8478132-8486070 | Fetal_Intestine | | SE_29095 | chr1:8478033-8485919 | Fetal_Intestine_Large | | SE_31622 | chr1:8477645-8478284 | Gastric | | SE_40658 | chr1:8476604-8477230 | Left_Ventricle | | SE_40658 | chr1:8477420-8481421 | Left_Ventricle | | SE_41679 | chr1:8477672-8478706 | LNCaP | | SE_42166 | chr1:8477479-8478781 | Lung | | SE_45677 | chr1:8477327-8485510 | Osteoblasts | | SE_47251 | chr1:8465934-8485673 | Panc1 | | SE_48103 | chr1:8477498-8481110 | Psoas_Muscle | | SE_48600 | chr1:8477483-8479198 | Right_Atrium | | SE_51176 | chr1:8473915-8486131 | Skeletal_Muscle | | SE_52725 | chr1:8477578-8478762 | Small_Intestine | | SE_53408 | chr1:8477393-8478777 | Spleen | | SE_54752 | chr1:8475052-8485774 | Stomach_Smooth_Muscle | | SE_58576 | chr1:8455425-8501956 | Ly1 | | SE_60758 | chr1:8454848-8500160 | DHL6 | | SE_62661 | chr1:8450826-8509851 | Tonsil |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH01I008416 | chr1 | 8476605 | 8477230 | | GH01I008417 | chr1 | 8477394 | 8478781 |
|
Enhancer Sequence | CAAGTCTGCA TTACTGTAAA TAGCGGTGCT TCCTAAACTT TACAGTACTT TGGAATCCTC 60
TGGGGGGTCC GTTAAAATGC AGATTCTGGC TCAAGAGACA AGGACAGGGC CTGAGAATCT 120
TCCATTTTAA CCAGTGATGA GAGTGCTGGC CTGAGGAGCA CACTGTGAGC AGTGAGGATA 180
GACAACGTTT GTAGAAGAGG GACAAGGTTT AAAAACAGAG ATCTTCTAAT GTACTGGTAT 240
GTGGCCGTGA CACATTTGCA CATTCTCAGT AGCATCAACC GACTAAGGAA GTCCATACTT 300
TGTTATGCAA CATTAGATTA AGCATTAATG AGGCTAGGAA AATTGTTTAT TTAAGGTTAT 360
AACCTGAAAT TAAATAAAAC TTCAGGCTGG AAGCTCATAT TGAATACTAG AATCATTTTT 420
AACCTCTTAA TATTAACAGA AACCTGATTA CTCAGTCTTA AAGCCCTTTC TCAATAGCAT 480
TTATTCTCTG CTGCAGGAAT ATGGTCTATG CAAATGACAT TTTGCCTGAA GAAAAAAGTA 540
CAGTTAATGG CCAGTAGTTA CGTACGTATT TAATAGAATT CATTCCCAGA AATGTGGCTA 600
AGAAAGGTGG TTGATTTTCA TGTTATTTAT TAAATTAAAA ATTTAAATCT CTAATACCTT 660
TCATCCCATT ACTTAAAGTT AAAAACGTCA AAACTGGCTG CCCTTTCACT GGGCCCTTGG 720
TGCCAAACAG TGACACATTT CCAATAGAGA AAATGAAGAT AGAAGGCAGG CTTCCCTTCC 780
CATTAACTTT GAACTTTCAA GTCCCTATCT GTCTTCCTAC AAGACTAAAT TATAAGAAGA 840
GCCTCCTCTT TGGTCCCATC CTATACATAC TTCGGTAGCA CAGCCCTCAC TTCTCTTCTT 900
AAAAGCCTTA AATGGGTCCC ATCCCCACAC TCACCCATAC ACATTCTTTG GAGGGAATTC 960
AAGGTCCCCC AAAATCTACC CTGCAGCTAT AATTTGGGCC CAAGTTCTAC TGCATCCGCT 1020
TATGCAACCT CCTTTCCAAC CATGCTCATG TACTTGCTGG GCACGTTTTA CAATTTCCTG 1080
TCTCCGTGCC TTTGTTCATA GTATTTCCTA TGGCTGGAAA GTTGCTTTTC CTCTACCCTC 1140
CCAACCTGGG CCTGTCAAAA ATGAATCCTT CCTTCAAAGC CCAGTTCAAA CACCGCCCCT 1200
CCAATTAGCT TTCCAGGAGC CTCTGTGCTC ACTTTGTGGG GCCTGAACCT CCACCCACCA 1260
GGGCCCTCAG CACATTCTAC CAAGTATGGC AGGTATGTAA ATGTCGTGCT GGCTCCCTGC 1320
AGGGCAGGGA TGGCACCTTG CTTCTCTTTA TAGATACCCT ACCCATTGCA GTGCTCAGTG 1380
GGCACCCAGA ACTTTAAAAA ATTGAACTAT ACACAAAATT TAGTTCTGAT AATGGGAAGT 1440
GAATGAAAAT 1450
|
