EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-00229

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:6257880-6259620

Target genes

Number: 19
Name	Ensembl ID

KCNAB2	ENSG00000069424
NPHP4	ENSG00000131697
CHD5	ENSG00000116254
RNF207	ENSG00000158286
RP1	ENSG00000226944
RPL22	ENSG00000116251
ICMT	ENSG00000116237
LINC00337	ENSG00000225077
GPR153	ENSG00000158292
ACOT7	ENSG00000097021
HES2	ENSG00000069812
ESPN	ENSG00000187017
TNFRSF25	ENSG00000215788
PLEKHG5	ENSG00000171680
NOL9	ENSG00000162408
PHF13	ENSG00000116273
KLHL21	ENSG00000162413
THAP3	ENSG00000041988
DNAJC11	ENSG00000007923

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata4	MA0482.1	chr1:6258546-6258557	TCTTATCTCTC	+	6.32
ZNF263	MA0528.1	chr1:6259275-6259296	TCTTCTTCCCCGCCCTCCACC	-	7.3
Zfx	MA0146.2	chr1:6259589-6259603	GGAGCCGAGGCCTC	+	6.01
Zfx	MA0146.2	chr1:6259431-6259445	CGGGCCGCGGCCTC	+	6.58

Enhancer Sequence

GAACCAGAAA CGTCATAGGT ATAAAAGTCC ATACAAATAC AAAACTAACG GAAGTGTGCT 60
CCCTTTGCCA GAGGGCCAAG AGGCATCACT GCCTGAGTGC CAGAGGTATA ATGGGGCAGA 120
TGCTGCTGTA CAAGCTTGGG GCCTGGGGTC ATGCCCTTTT GATGGGGAAA TCATTCTAGC 180
ACTCTTGACT CACTCAAACT TTCCAGTCTC CCCAATCTCT ACAGGCATGA AGGTCTCTTA 240
GTTTATGAAC CACAATAAAA TGAACACTTC CTTTTGTTTG CCCTAACATT CCCAATTTCA 300
AAAAAATACT ATTTTTCCAA AATTAGAGTG CAGGCATACA AAATGCCTTG CATACCCACA 360
ATTTTCATAT GAAATCAATC CTTGTCCTAC ATGTTCAGAG TAGGGTCCTG ATCCGTCTTA 420
GCTCATCTCC CTTAATCCTG TCTCATCCAC CTTCTCATGA AGGGAGTTGC AAAGTATTCT 480
AGGTGCCTGT CCACTCCAGC TTGGACAAGG TTAAGGCTAA AACCTAGAAT CTTATTACAA 540
CACTACCGTC AAGAACTTCT GACATTTTGA TTCGCTTCAT CTATGCATTA GTACTTCCAA 600
ACCACCCGGC AAAGCACATC CTACAAGGTT CCAGTTTCTT CACTCTTACG AAGAAGCTTG 660
TGTTAATCTT ATCTCTCTAC AAACTTGACA CCATTAATGC ACTTGTGCAT CGTACCAACC 720
TGTACTTTCA CGTTTAAAAG CTCTGCAGAA CTAAATAGAC TTTTCCAAAA ACACATCTTA 780
CCTCCCTTCA TGTTTAAAAG AACTTCATCT AAAACTTGTG TTAACTGGAT CAACTTTTCA 840
AACATTTGGC CACTACAAAA ATCACTGATT TATTTTTTAC AACGTCTCTT CGCAGTAATA 900
ATCTAAGAGG GGTACTTTAA GATCTATTCC GAACACACAC AATCAATCAA GAGACCTACC 960
CACAACGGGC TTGATACTTC TCCATCAAGG TTTTAAACCA AAAGGCATTC AAAAGCCCAA 1020
CCAGACAGAA AGAGCAGAAG AACCGGAAAT GTTAACCAGG GAGTCCCAAC AAAAGAGGAA 1080
AAGTAGGATC TTGGGACGAA GAACACGGAA AAACAACTTT CTCAAATAAC CTAGGAGGAG 1140
GGCGCCGCAC AGCCCAGTCC CAGCATAGCT AAAGGAGAAT GCAATGAGAG CCTTCTCCCT 1200
ACACCACTGC AACACCCGTT TGGGTCTGTA CAGTGCGCCC TGATAAACTA ATTTCCTCTG 1260
GGGACGCTAA AAAGCTCCTC AAACCCAGGC CTCCTCTCCG AAAGCACGCC GACCAAGCCG 1320
CCCTTCCGCG GATTCGTCCC CGAGTCTTGG CCGTGGACTT CCGAATGCGC GGCTCCCCAG 1380
GGTAGCAGGT CCCGTTCTTC TTCCCCGCCC TCCACCCAGG TAATCAGGCC CCCGGCCGGG 1440
GTCCGAGGAC CAGTGGCCGG CCCAGACCGC AGTCTCCAGG CTCCAGCTCC CCGCTAGCCC 1500
CTAGCTGGGG CCCCGGGCCT CCGAGACCTC CCGGATCTCC CTCACGAGCC TCGGGCCGCG 1560
GCCTCCTCCG CCTACAACGT GCTGGGATCG GCAGGGGCTC TGGCCCGCTC CGGCCGACCT 1620
GCCAGCCCAC CCCAGCAGGA CGCTGCAGGG CGCCGTCCCC AGCGAGCCTG GGTAGATGCC 1680
GGGCTCGGCG AGGCCCACGT GCCTCCCCTG GAGCCGAGGC CTCACGCGGA GCCATACTAA 1740