EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS105-00044 
Organism
Homo sapiens 
Tissue/cell
IMR90 
Coordinate
chr1:1014690-1016130 
Target genes
Number: 40             
NameEnsembl ID
NOC2LENSG00000188976
MTND1P23ENSG00000225972
SAMD11ENSG00000187634
RP11ENSG00000234711
PLEKHN1ENSG00000187583
C1orf170ENSG00000187642
HES4ENSG00000188290
ISG15ENSG00000187608
AGRNENSG00000188157
KLHL17ENSG00000187961
LINC00115ENSG00000225880
FAM41CENSG00000230368
C1orf159ENSG00000131591
TTLL10ENSG00000162571
TNFRSF18ENSG00000186891
SDF4ENSG00000078808
B3GALT6ENSG00000176022
FAM132AENSG00000184163
RP5ENSG00000260179
UBE2J2ENSG00000160087
SCNN1DENSG00000162572
PUSL1ENSG00000169972
ACAP3ENSG00000131584
CPSF3LENSG00000127054
GLTPD1ENSG00000224051
TAS1R3ENSG00000169962
DVL1ENSG00000107404
MXRA8ENSG00000162576
AURKAIP1ENSG00000175756
CCNL2ENSG00000221978
RP4ENSG00000224870
MRPL20ENSG00000242485
ANKRD65ENSG00000235098
TMEM88BENSG00000205116
VWA1ENSG00000179403
ATAD3CENSG00000215915
ATAD3BENSG00000160072
ATAD3AENSG00000197785
SSU72ENSG00000160075
CDK11BENSG00000248333
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
KLF5MA0599.1chr1:1015447-1015457GCCCCGCCCC+6.02
MAXMA0058.3chr1:1015690-1015700ACCACGTGCT+6.02
NR2C2MA0504.1chr1:1015277-1015292TGACCCCTCACCTCC-6.06
ZEB1MA0103.3chr1:1015721-1015732GCGCAGGTGGG-6.62
Number of super-enhancer constituents: 7             
IDCoordinateTissue/cell
SE_24070chr1:1014747-1016073Colon_Crypt_2
SE_24817chr1:1014715-1016105Colon_Crypt_3
SE_27529chr1:1014709-1015893Esophagus
SE_34539chr1:1014601-1016160HCT-116
SE_41944chr1:1014719-1016037LNCaP
SE_58139chr1:1014749-1016027VACO_9m
SE_65935chr1:1014576-1016194Pancreatic_islets
Number: 1             
IDChromosomeStartEnd
GH01I001077chr110132591018692
Enhancer Sequence
GGGGAGGCTG AGGCTATGGG GACTCCGTGC CGGGAGGCTG AGGCTATGGG GACTCCGTGG 60
GGGGAGGCTG AGGCTATGGG GACTCCGTGG GGGGAGGCTG AGGCTATGGG GACTCTGTGC 120
AGGGCCGCTG TGAGGCCCTG AAAGCACTCG TCGGAGGCTC CTGCTTCCTG AGGTCCGTGA 180
CTCGGGTCAC ATGCCGCCTC CAGGAAGCAC CCTGGCCCCT GCAGCTCTGG GAACGTCCTC 240
CCGACAGCTC CTGGGAATAT CCTGGCACTG AGGTCACTCT GGGCTCCCGG CTGACACTCG 300
TGCCGGAGGC AAAGGTGAGG AAAGGCCGGA GGAATGTGTG GTCTCGGCGC CAGGCCAGGC 360
CTCCCTGTGC AGGAGAGGAG CCAGCAGCTC CCCTTCTCTC AGCTCAGACG GTCTCTCAGG 420
GCTCTCGGGA GGCTCAGAGC AGCTTGGCTG GCAGATTCCA GGGCAGGGGG TGGGCCCGCC 480
TGGTCCCCTC CGTCGCAGCC AGTGGGCGGG AGGCTGGGCT GGTGAGCGTG TGGGCGTGTG 540
TGAGCACACG TGCCCATGCT TGAGACATGG ATGCTGGTGT GAGCACCTGA CCCCTCACCT 600
CCTTCACTCG GTCTCCTCAC GCCCTCTCAG GGACTCCTTC CCCTCCAGGC CTCGGTTACG 660
GGTCACACCT GGCACTGCCA GGCCTGGGGA CGTGGTGCGG CCGGTGCGGG GAGGGGCCTT 720
CCAGGCTGCT GTGGGGCCCC CGGCCTCGCC CCACCCCGCC CCGCCCCGTG CTGGGCCATT 780
GCCTCAAATG CAGCGGCTCT GTTGGCCGTG GGACTGGAAT TCTTTCCCAA GGGCCCAGAT 840
GTGCAGAGGG GAGGCCGGTG CGGGGGAGCA GGGCTCCGGG ACGTGCACTT GGGTCTAGCT 900
TTGCCCCTGA CGTGCTGGGG CCGCCCCTAG GCCCAGCTCA GTGTGTCCCT CCTGTGCCCA 960
GTGAGGAGGG CGTGCCCCTC GCTGCCACAG GTCCTGGCTG ACCACGTGCT GCCCAAGGGC 1020
CAATCGCGAG TGCGCAGGTG GGGGACGTGG GGAGCCAGCT GAGGGGGATA TGTGGAGGTG 1080
TCAGGATGAC CCTGGGTTTT TGGTTTGGGC CACTGGGTGG GAGGAGGAGG AGGGGACCCA 1140
GAATTGAGAG ATGGGGCCTG GGGGGCTGCT CAGAGGGTGG GCTGGGAGGT GCCTGTCTGT 1200
GTCTGGCCTG GCCTCCAGAC CCTGCCTGGC TGGACCTGCT GTTCGTGCCT GTTTCCGATT 1260
TTATCCTCCA AACCAGACGC CCAGCCTGGT GCAAATGCAG GAGTGGAGTT TCCAGGGGGA 1320
TGTGGACTCC TTCCCTCCAC CCCCACCTCG GTCCCTGTCT CCTTCCCTCC GCCCCCACCT 1380
CGGTCCCTGT CTCCTTCCCT CCGCCCCCAC CTCGGTCCCT GTCTCCTTCC CTCCGCCCCC 1440