EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-47777

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chrX:153388530-153389760

Target genes

Number: 34
Name	Ensembl ID

RP11	ENSG00000217889
SLC6A8	ENSG00000130821
PNCK	ENSG00000130822
BCAP31	ENSG00000185825
ABCD1	ENSG00000101986
PLXNB3	ENSG00000198753
U52111.14	ENSG00000232725
SRPK3	ENSG00000184343
SSR4	ENSG00000180879
IDH3G	ENSG00000067829
U52111.12	ENSG00000184844
NAA10	ENSG00000102030
HCFC1	ENSG00000172534
TMEM187	ENSG00000177854
IRAK1	ENSG00000184216
MECP2	ENSG00000169057
FLNA	ENSG00000196924
EMD	ENSG00000102119
RPL10	ENSG00000147403
TAZ	ENSG00000102125
DNASE1L1	ENSG00000013563
ATP6AP1	ENSG00000071553
GDI1	ENSG00000203879
FAM50A	ENSG00000071859
PLXNA3	ENSG00000130827
LAGE3	ENSG00000196976
UBL4A	ENSG00000102178
SLC10A3	ENSG00000126903
FAM3A	ENSG00000071889
IKBKG	ENSG00000073009
G6PD	ENSG00000160211
ATF4P2	ENSG00000231342
DKC1	ENSG00000130826
HMGN1P26	ENSG00000229237

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chrX:153389233-153389254	AAAAAAAAAGAAAAAGAAAAA	-	6.09
Klf1	MA0493.1	chrX:153389427-153389438	GGCCACACCCA	+	6.62

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2
Chromosome	Start	End

chrX	153389200	153389749
chrX	153389356	153389701

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH0XI154123

chrX

153388706

153390114

Enhancer Sequence

TGAATGAATG AAGATGCTGA GGCTCTCCCA GCTGATGGAA CCACTATTCT GATTGATTGG 60
CTTCAAAGAC TCACCAGAGA AAAACATTTT AAAATGTAGG GCCAAACCTC TGATACTATA 120
AAAGTGCTGG CCTTTTAAGA CAAACTCTCA AAGTTAGAGT TTCCCCACGG TGAGAATCTC 180
TCCACACAGT TGGGGACTGG GCAGCTACCC CAGCTGGGCA CTAGAGGCCT GGGCCACCCT 240
CACACCCTGG TCAGTGGTAG CACGGGGGCT GCCAGACCTC ATCAAAAGCT TGACTTTTCT 300
TTGACTTCCA GGAGGAGGAA CCCTGTGAGG CACTGCTCCA CTCCCTGCAT GGTTGAGGAC 360
AGGTGGGAGA GGGGAGGCTA CAATCAGGCT TCAAGGTTAT TAGGATGGGC CGGGCGCGGT 420
GGCTCACGCC TGTTATCCCA GCACTTTGGG AGGCCAAGGT GCGCGGATCA CTTGAGGTCG 480
GGAGTTCGAG ACCAGCCCGG CCAACATGGT GAAACTGCTT CTCTACTAAA AATACAAACA 540
TTAGCCGGGC GTGGTGGTGA GCACCTGTAA TCCCAGCTAC TCGGGAGGCT GAGGAGGCTG 600
AGGCAAGACA ATCGCTTGAA CCTGGGAGGC GGAGCTTGCA GTGAGCTGAG ATCATGCCAC 660
TGCACTCCAA CCTGGGCAAC AGAGAGAGAC TCCGTCTCCA AAAAAAAAAA AAGAAAAAGA 720
AAAAAGGAGA AACGGTTATT AGGATGGTCC TGGGATGGAG AGAACCAGGG ACAGTAAGGG 780
CCTGGCCAGG GTAGGGCAGC TGCTGCAGGA ACAGCAACCC AGCAACTGGC CACACAGAGG 840
GCGAGTGACC CCTGGGCGGA CTGATGGGCC ACACCACAGG CCACACCACG GACCACAGGC 900
CACACCCAGA GAGCTAGTCC TGGGGCAGGG AGCGCCTCTG AGCAGGAAAT GACAGAGGAA 960
GTTTCTGGTG CAGCTTTACT GATAAGGAAA CAAACAAAGA CTGTGTGATA GCAATCAGAA 1020
AACATTTCAG TCAAGCAGAG TGGAAGGAAG ACTGCTTTAT CTTTCTGTTC CCTCTAGTGA 1080
GAATTATGTC ACAATATCAT TGTCAGATGA AGATGCGATC TAACACTATG CAGCCAAAAT 1140
GTGGGGAAAA AAGATAACAC AGGTAGCTTC AGTACAAAAT ATAATAGGAA CAAAAACATT 1200
GTACTTTGCT GCCTTTTGTT GTATTTGTCA 1230