EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-35785

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr5:139256580-139257260

Target genes

Number: 11
Name	Ensembl ID

MATR3	ENSG00000015479
SNORA74A	ENSG00000200959
PAIP2	ENSG00000120727
CTB	ENSG00000249758
TMEM173	ENSG00000184584
UBE2D2	ENSG00000131508
CXXC5	ENSG00000171604
CTD	ENSG00000250635
CYSTM1	ENSG00000120306
PFDN1	ENSG00000113068
ANKHD1	ENSG00000131503

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr5:139257079-139257090	ACAGGGTGTGG	-	6.14
Nkx2-5(var.2)	MA0503.1	chr5:139256919-139256930	AGCCACTCAAG	+	6.62

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH05I139876

chr5

139256290

139257701

Enhancer Sequence

AAGAGACTGG CCCAGAGGCC TCTCCAGGGC TTCCATGGTC CTATGACACC CCAGGTCAAA 60
CCTGCCTGTC CTCTGGGGCA AAGCCTGACA TCAGGGGCTG GTACAGCCAC CTCAGGACAT 120
TCCCAAACTC CCTTTCACCT GGGATGAGAC ATCTGTTTCT CTAACTCAGA AGTGGGTTGG 180
ACCAAGCTAT TGTGTTAGCA CCGCAAACTT CCTGCCGACT CCTCCTGCCC GCCAGTTCAG 240
GAAGGCAGGA GCCTCTTGTG AGCTGGCAGA GCTCTGACTA TAAGGAAGGC CTACTCTAAT 300
TTGTGGAAGG AGCCCTGGGC TCCACCTGAA CAGAGCAGTA GCCACTCAAG AGCCAAAGTG 360
ATGCCACCCG AGCAGCCTGC TGCTCCCCAA TGACCTCCCT GTACCCTCTT CTAGCTGCCC 420
TATCCCTGTA GCCCTGGTTT CCCTTCGGCC TGGGCGGGCC AAACCAACCC ACCTTGGGAT 480
GAGTCAGAGG GGGCAGACCA CAGGGTGTGG TTGCTGCAGG TCTCATGGGT TCTGTGGATA 540
AACAAGGAGC CTGGGCATCT CTGCCTGGGA AAACATCCCC AGCAGGGGCC TCCTGGTCCC 600
CAGCAGTGGC CCTGTTCACC TGTTCAAGGG TAGGCTCTTG CCTGCCATGG ACTGCACATG 660
GTAGCAGAAG TGGTGTGGTA 680