EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-33020

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr4:90460490-90462380

Target genes

Number: 3
Name	Ensembl ID

FAM13A	ENSG00000138640
TIGD2	ENSG00000180346
RP11	ENSG00000251095

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOS	MA0476.1	chr4:90460769-90460780	GATGAGTCACA	-	6.14
HLTF	MA0109.1	chr4:90462335-90462345	AACCTTATAT	+	6.02
IRF1	MA0050.2	chr4:90460591-90460612	GTTTATTTTCTTTTTCTCTTC	+	6.02
IRF1	MA0050.2	chr4:90461112-90461133	AAGTTGTTTCTCTTTTTCTTT	+	6
JUND	MA0491.1	chr4:90460769-90460780	GATGAGTCACA	-	6.14

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH04I089538

chr4

90459445

90462184

Enhancer Sequence

TTTCCATGGA TAAACCTTTA CGAAGTTAAA TATTTCAGGT CATCCTTAGC CGTAAGTGTA 60
AAGTTGTAAA ATGTTATTTC TAGCATCTTC CTACTTATCC TGTTTATTTT CTTTTTCTCT 120
TCTGGGTTTT CACCTCCTCT TCTCTTTCTC CCCACTATCA CCACCAAAAT ACCCTTGCCC 180
TCCTCCCCTC TGGAGGCCAC ATGATATGTG TAATGACTGC AGAATGGCCT TGTAATTATG 240
CCCTCTATCT GAGGTCCTTA TCTTAGACTG ATTTATTTAG ATGAGTCACA CGATTTCACT 300
GATGCGCTTT CCTAACATGC AAGCTGGGGT AAATAACAGT GACTTTGCAA AGTTGTGAGT 360
TTTCCCAAAG ATTCTCATAA AATGCCTGCC ACATGGTAAC TCTGACTCAA GATTATTATT 420
ATCCAGGCAG TCTCACCCAA ACTACATTCA TACCTCAAAA TTATTCTGTG CCTTCCCTAA 480
TCAGCAGTTC CATTTCCACT GTGACTTCAC ATCAGAAAAC TAAGTGAGGA AAGGATTAGA 540
CGAACTAATT TAAATATGAA TTACTTACAA CAATGTGTAG CCAGATTAAT GAATGATGTG 600
AATTTGATGA GACACAGATA TGAAGTTGTT TCTCTTTTTC TTTTAAAAGT CATTTCCTTC 660
AACTGTTCTG TAGAATTTTC ATTTCTATCC CTTAGTGACA TTCTAAAGGA AATCCCATTC 720
TTTCTCATCA CTCTCAGCTA TTTGACATCA ACCTAGCTAG CTTATATCCA ATTTAAATCT 780
TTCTCTTCCT TCCATCAGCA ACAAGATTTT GGCTCATAAG ACTTGGAATT GAAAAGTATC 840
AAGATCTGTT GCAGAAACTC TTCCCCATCC TCCCTTTCCT GAAGCTCTTT TTCTCCTGGT 900
GGGTTAAGAA CAGAGAAGTG AGAAGCAAAG AAAAGTTCAG TCAAATGACT CATTTAATTG 960
GGGTTGTTCT TTTCCTGTCT TGACTTTGAC AGTTTCCCTG GTGATGACCT CTGAGTGAAA 1020
ACCAAATGCT GATTCTCTTG TGGGGTGCAT GTGTGAATTC TTTAGGAGAC CCTGCAGAGG 1080
CCTCCCAACT ATACAGTTCT GTGCCACAGA AGATCTGCTC TGCCTTGAAC TCTTCTGCCC 1140
AATGAATCCC TAGGGATAGA ATTTCAGATG GTAAGGCAGC TGTCCAAGGT GATTTAGGGT 1200
GGGGGCTTGG ACAACTTTTG CTATCGTATC CCAAATTATA GCACTTGGGT AGGCAGTGTC 1260
TAATGTATGT ATCCATTTCT GAATCCATTC TTGCCTCAGA GGATTGTGTT TGCACTGTCT 1320
TTATTTGTCT TTACTTACTT CAAAGAGTGT TGTGGCAGAG GCAGGCACAG CATTTGAAAA 1380
GTGAAGGAAT TAAAATGACT CTAACAATGA TGAGGGAAAC TGGCAGAGTT TGGAACCAAC 1440
AAAAGCTAAA TCTCAGGGAC TAAGTACTCT TAGAATTTCT AATTGCATCT GCTCTGAAAA 1500
TGTGAAATCC CCTATGAAGA AGGAGAGTTT ACCTCTTGGA GACTTAAAGA TGTAGTCAGA 1560
TTTGTGCTAC TGAGAAGGTA GTGTTCACGT TTAACATCTG TGCTGTCCAA AATGCCCCAG 1620
CCTCTTACAT TCCAGTCGTG TGGCTGAGCA AGGTTACCAG TGAGGCTCCA ACTGAAATTA 1680
TTATCACCCT TACAACAAAT TATAAGCAAA TACTCATTAT GAGAAAGCTG TTAAGAGAAA 1740
GCATAATTTT ACCACAATGT AGATCTCAAA GTTTAGGTCA TTCCACTTAC TTGTTTAGCT 1800
TTTAACAAGA AATTAAAGTT CCAGTTTCTT TCGTACAGTG TATAAAACCT TATATTTAAA 1860
AAATAAGAGC CAATATACCT TACTTAGAAA 1890