| Tag | Content |
|---|
EnhancerAtlas ID | HS101-27740 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr20:52421390-52423040 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NEUROG1 | MA0623.2 | chr20:52422326-52422336 | GACATATGTC | + | 6.02 | | NEUROG1 | MA0623.2 | chr20:52422326-52422336 | GACATATGTC | - | 6.02 | | RREB1 | MA0073.1 | chr20:52421451-52421471 | AGGTGGGTTGTGTTTTGGGT | - | 6.54 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_02652 | chr20:52421742-52422583 | Astrocytes | | SE_33779 | chr20:52421185-52424004 | HCC1954 | | SE_36429 | chr20:52421151-52423713 | HMEC | | SE_43381 | chr20:52421064-52424290 | MCF-7 | | SE_45892 | chr20:52421213-52423985 | Osteoblasts | | SE_47103 | chr20:52414579-52428224 | Panc1 | | SE_56621 | chr20:52421162-52423076 | u87 | | SE_64967 | chr20:52421394-52423126 | NHEK |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I053804 | chr20 | 52421158 | 52423926 |
|
Enhancer Sequence | ACCAGTTTAT CCCGAATTTT GTTGCATTTC ACTATTTCTT CTGTTCAGCA TCAAATGTAG 60
AAGGTGGGTT GTGTTTTGGG TTCCTATCAT TCAAAATTTC TGTACCGTTA AACCCTACAA 120
TTACACATAG TGGAATGAGA CGTTGTCACC ATGAGAGGTA AAAAGGAGAC AGGACCCCAC 180
TGAGGAAACC AGGGATTCAT GCCTCTGACC TCCAGCTCAC CCCAGGATAC ACACTCAGTG 240
ATGAAATAAT CCTAACCCTA AATTGCATGA ATTACATTGT TCTCCCTCCC TGTCCCTTTC 300
CTCTGATCCA TCTCTTTTGC AAAACTCATG CAATCTGAGT GTGTTTCATG GTAAAATTGT 360
AATGTATACA GTTTTCCCAT TTGTGTTTTT ATTTGCAAAC TGACAGCCGC TTAACCCTGG 420
CACTCGTGGA AAATATTGCC TTGGAAAACG ACCTCACCTG ACTATGGCAT CCATGAGGAG 480
CAGTGAATGA TACTGATAGG GGTTAAGACT TGCTTGCCCC TCTGCTTTTG CACAAGTGGT 540
GCCTCTGCCT GGAATACCTT GACCTGCCTC CTGAGCTGTG TATCCAAATC TCAGTTCTGG 600
CATCCCTCCC TCTGTGATGC CATCCTGGGG ATCTCCAGCA GAGTCATCAT GGCCTTCTTT 660
GTCCCTGCCC CTTACATCTG CTGTGATACT TTTCCTGGAG GTCAAAACAC AAATACGTAG 720
AATGCTCAAT TTCCACAGAA GGCTAAGAAA TGAACCAAGT GGGTTGGGGG TGAAGAACCG 780
GGAACCAAGG CACCAGAGTG AACTGGGAAG CCTGTGCTGG GTCCAAGGGT GCAGCTGCTG 840
CTCAGGCCTG GCCTGGTTTC TATGAGGAAT GTGGGCTCAG GGTAGCCAGA GCTCCTGATT 900
TTTCAAGAGA ACTGGAAATC TGAACTTTCT TTTTTTGACA TATGTCTATC TTTAAAGGCA 960
GTTGTTCCAG ATTTTAAAAT GACTCCATTC AGAGTTGATA AATCACACAC ATTCACAGAA 1020
TAAATCCACT CCACGGGCCA CCAGTGACAG CCCATGCTCT AGGCAAAACT CTCCGGAGTC 1080
TGAGGCTCTG TCCTTTCTTT CTCAAATTCC CAGTGCCTGG GGCACGGAAC CTGGCATGAA 1140
GAGGCACTTA GGAAATGTTT GTTGAGTGAA TAGATGAGGC AATGAATCAT CAGGATATTA 1200
AAATTCTTTC CACTCTGCAT GAGCCATACA TATAGTGTAA TTTGTATATT TATATATGCT 1260
TTCCTTCGGG CCCATGAACA AAGCCAGGTA CTTGCCAAAG TGCAAAAAAA GTTTGATATT 1320
TGTATAACAA TAATAAACCC AGGGCTGGGC GCAGTGGCTC ACACTTGTAA TCCCAGCACT 1380
TTGGGAGGCT GAGGCAGGCA GATTGCCTGA GCTCAGGAGT TCGAGACAAG TCTGGGCAAC 1440
ATAGTGAAAT CCTGTATCTA CAAAAATTAA AAAAAAATTA GCCAGGTGTG CATGCCTGTA 1500
GTCCCAGCTA CTTGGAAGGC TGAAGTGGGA GGATGGCTTG AGCCCAGAAG GTGAAGGTTG 1560
CAGTGAGCCG AGATTGCACC ACTGCACTCC AGCCTGGGTG AAAGAGTAAA ACCCTGTCTC 1620
GAAAATAAAT AAATAAATAA ATAACATTAA 1650
|
