EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-27639

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr20:49218100-49218600

Target genes

Number: 17
Name	Ensembl ID

B4GALT5	ENSG00000158470
RP5	ENSG00000237788
SPATA2	ENSG00000158480
KRT18P4	ENSG00000229222
SNAI1	ENSG00000124216
UBE2V1	ENSG00000244687
TMEM189	ENSG00000240849
CEBPB	ENSG00000172216
RP11	ENSG00000203999
PTPN1	ENSG00000196396
AL133230.1	ENSG00000239742
RP4	ENSG00000232043
BCAS4	ENSG00000124243
PSMD10P1	ENSG00000228663
ADNP	ENSG00000101126
DPM1	ENSG00000000419
MOCS3	ENSG00000124217

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr20:49218489-49218506	AGGTCACGCAGAGGTGA	+	6.96
SP2	MA0516.2	chr20:49218318-49218335	CACAGCCCCGCCCACCC	+	6.2

Enhancer Sequence

CGAGAGGAGA ATGTAATAAT TTGCCTAGGT CAGCACCTCT GAAAGCCACC TGCCACCTAA 60
GCCCTCCTGT GAACTGAGAA CAGCCCCGGG GTATGAGCCC TGTGGAGAAG GTTCAGTGCG 120
GGGTGCGTGG ATGAGGCAAA CAGGGAACTG TGTGGGGCCT TCCATGGAGC CAGCTGCGAC 180
CCTGACAACA CTCCAAGTTT GGGTTTGTAG CCACAAGCCA CAGCCCCGCC CACCCAGGTC 240
AGAAGGTGCG AGATGGGGCC AGTTTCTGGC TGGATGTGCA TGAGCCTATC TACTGTGAAC 300
TCTTAAAATC TTCCTGAGCC CCATGAGGGC TGTTGTTATC CCCGCTTGCC AGATGAGGAA 360
ACCAAGGCCC AGAGAGACAC GGCCCACCCA GGTCACGCAG AGGTGAGGCC AGGATGTCGG 420
CCCAGGCTGC GTGGCCCCAG AGCCCCCGAC TCCCAGTCAT CATGCCATCA GCAAAGCAGG 480
GCCACCGCCC GGGGCGGGGT 500