Tag | Content |
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EnhancerAtlas ID | HS101-27548 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr20:48340430-48342620 |
Target genes | Number: 19 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr20:48340753-48340774 | AAAAAAAAAAAGAAAGAAACT | - | 6.04 | POU2F2 | MA0507.1 | chr20:48342348-48342361 | TTCATTTGCATGA | + | 6.05 | ZNF263 | MA0528.1 | chr20:48341826-48341847 | TTCTCTTTCTCCTCATCCTCT | - | 6.95 | ZNF263 | MA0528.1 | chr20:48342366-48342387 | GGAGGATGGGAGAGAGGGAGA | + | 7.53 | Zfx | MA0146.2 | chr20:48340507-48340521 | CAGGCCGAGGCGGG | - | 6.62 |
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| Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
SE_00339 | chr20:48340405-48342701 | Adipose_Nuclei | SE_09853 | chr20:48340471-48342941 | CD14 | SE_26408 | chr20:48340723-48342058 | Duodenum_Smooth_Muscle | SE_53007 | chr20:48340933-48341684 | Small_Intestine |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 48341215 | 48341776 | chr20 | 48342320 | 48342493 | chr20 | 48342175 | 48342563 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I049724 | chr20 | 48340925 | 48342936 |
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Enhancer Sequence | GTGATACATA TTCAGTAGAA ACTGGACTTC AAGAAGGCCG GGCGCAGTGG CTCATGCCTG 60 TAATCCCAGC ACTTTTGCAG GCCGAGGCGG GTGGATCACT TGAGGTCAGG AGTTTAAGAC 120 CAGCCTGGTC AACATGGTGA AGCCCCATCT CTACTGAAAA TACAAAAAAT TAGCCAGGCA 180 TGGTGGTGCG CACCTGTAAT CCTAGCTACT TGGGAGGCTG AGGCAGGAGA TTAGCTTGAA 240 CCCAGGAGGC GAGGTAGCTA TGAGCCGAGA CTGCCCCACT GCACTCCAGC CTGGGTGAGA 300 GAACAAGACT TCATCTCACA AAAAAAAAAA AAAAGAAAGA AACTGGACTT CAAGTACCTA 360 TACAACCACT CTGTTTTTCA GTTTCAGTAC AGTGTTCAAT AAATGATATG AGATATTCAA 420 CACTTGATTA TAAAATAGGC ATTGTGTTAA TTTTACCCAA CTTTAGGCTA ATATAAGTGT 480 TCCGAGCACA TTTAAGGTGG ACTAGGCTAA ACTAAGATGT TTGGTAGGTT AGGTGGATTA 540 ATGCATTTTC AATTTACGGT ATTTTCAGCT CACAATGGGT TTAGCAAGAT GTAGCTCCTC 600 TGTATGTTGA GGAGGACCTG TGCTGTTCTG TCTGGCTCCG TTTGCTCACC ATGTTTGTGA 660 GATTCATGCA TACCGATGAG TGAGATTGTA AAACCATTCA TTTTAATTGC TGAATAGTAT 720 CCTGTTGTGT GAATACACCA TAGTTTACTT TCCAGTCAAC TGCTGTCATC TGGCATTTGG 780 ATCGTTTCTA GTTAGAGGAT ACTAGGAATA AAGCTGCTAT AAGCTCCCTG GGACAGTGGC 840 TCTCAGGCTT GTGAAATACT CTCTTGATGT AGTGTATTAG TCAGGCATAG CTGGGGGGCT 900 CACATGATAT CAGCAGCCTT AGTTTCTCTC AATATCTTAG TTCTGCTTCC CTCTGAGTTG 960 GTTTCATCAG ATTCATGTGT TCCTCCTGAC CAGCTTATTC TCAGCTGCTC CAGGCTTCCA 1020 TTCCCCAGCC CAGTCACTTA GCCAAAAAAA AGAAATTTTA TAATAAAGTC TCATTGGTCT 1080 GGCTTCATTC ATATGTTCCT CCCCGAACCG ATCCCTGTGA TTAAAGGGAT GGAGTGTGCT 1140 GATTGGACAG AAGTGGTCAC ATACCCACTC CCCAACCTGC CCCCACCCTG GAGCCAGGAA 1200 GCAAGATCAG CTTCCTGTGA ACCACAAGGT TGATGTAGGG AGGGGTGGCT CCCCGAGGGG 1260 AAATCAAAGT GCAATTATTC AAGTGGAATT GTTGCTGGGC AGGCAAAAAC AACAGATATT 1320 TGTGGACCAC ACCAACTTTT TTTTCAATGC CTTCATGCCT TTAGGTGCTC TGTTTCTGCT 1380 ACCAGGAAAT ACTGTGTTCT CTTTCTCCTC ATCCTCTAAG ATCCAGCTTA AATATTTTTC 1440 CCATCCTAAA ACCTCCCAGA ATTTTTGGAC TTGATTCTGG ATGGATGTTC TTTTTTTCTT 1500 TCTTTCTTTT AAGACGGAGT CTCGCTCTGT TGCCCAAGCT GGAGTGCAGT GGCGCTATCT 1560 CGGCTCACTG CAACCTCCGC CTCCCAGGTT CAAGCAATTC TGCTGCCTCA GCCTCCTGAG 1620 TAGCTGGGAT TACAGGCGCA TGCCACCATG CCTGGCTAAT TTTTTGTATT TTTACTAGAT 1680 ACAGGATTTC GCCATGTTGG CCAGGCTGGT CTCGAACTTC TGACCTCAGG TGATCTGCCC 1740 ACCTTGGCCT CCCAAAGTGC TGGGATTAGA AAGGCCTGAG CCACCCCGCC CGGCCTGGAT 1800 GGATGTTCTT AACCTCCATT TACTCTCCTT CTGTTGAAAG AGGCTCAAAA GCTTAAAACA 1860 GCATTCCACA GGCTCTCTTG CAGCTATGAC AGTGGGAAGT TAAATTCTGT CAGTTAGATT 1920 CATTTGCATG AGATCTGGAG GATGGGAGAG AGGGAGAGGT CGTCTTGCTG GAGCTGTGTC 1980 AGCTAAGGGA GCGGTTCTGC AGGTGGGAGG AGCATGTACA GTGGAGTCCA CTGTGCAGTC 2040 CCCACTTAGG AGGGTGTGAG GTAGTAGGAT GGAGGCCATG GTGGTGGCAG GGAAGCAGCA 2100 GTTTGGTAAC CTTGGGAACA AGGCCTTGCT GGAGGAACCT TGAAATCAAA AGCCTGAAAT 2160 GGCCCCTGAC TTCTACTCTT CCAGACCTCC 2190
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