EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-27064

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr20:33136710-33137700

Target genes

Number: 27
Name	Ensembl ID

C20orf144	ENSG00000149609
NECAB3	ENSG00000125967
PXMP4	ENSG00000101417
ZNF341	ENSG00000131061
RALY	ENSG00000125970
RP1	ENSG00000229472
EIF2S2	ENSG00000125977
RPS2P1	ENSG00000225246
ASIP	ENSG00000101440
XPOTP1	ENSG00000214185
RP4	ENSG00000236456
AHCY	ENSG00000101444
ITCH	ENSG00000078747
CDC42P1	ENSG00000234933
FDX1P1	ENSG00000181741
DYNLRB1	ENSG00000125971
MAP1LC3A	ENSG00000101460
PIGU	ENSG00000101464
TP53INP2	ENSG00000078804
NCOA6	ENSG00000198646
TRPC4AP	ENSG00000100991
PROCR	ENSG00000101000
MMP24	ENSG00000125966
EDEM2	ENSG00000088298
MT1P3	ENSG00000126005
UQCC	ENSG00000101019
CEP250	ENSG00000126001

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr20:33136728-33136743	TGAACTCCTGACCTC	-	6.22
RFX1	MA0509.2	chr20:33137551-33137567	TGTTGCCATGGCAATG	+	6.14
RFX1	MA0509.2	chr20:33137551-33137567	TGTTGCCATGGCAATG	-	6.17
RFX2	MA0600.2	chr20:33137551-33137567	TGTTGCCATGGCAATG	-	6.66
RFX2	MA0600.2	chr20:33137551-33137567	TGTTGCCATGGCAATG	+	6.67
RFX5	MA0510.2	chr20:33137551-33137567	TGTTGCCATGGCAATG	+	6.92
RFX5	MA0510.2	chr20:33137551-33137567	TGTTGCCATGGCAATG	-	7
SP1	MA0079.4	chr20:33137585-33137600	GGTGGGCGTGTCTTA	-	6.01
SP8	MA0747.1	chr20:33137585-33137597	GGTGGGCGTGTC	-	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_65773

chr20:33136820-33138596

Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH20I034549

chr20

33137180

33137909

Enhancer Sequence

TGTTGGCCAA GCTGGTCTTG AACTCCTGAC CTCAGGTGAT CCACCCACCT CGGCCTCCCG 60
AAGTGCTGGG ATTACAGGTG TGAGCCACCA TGCCCGGCCC CACTTTGCTT TTTTGGTTGT 120
GGTTTTTTGG TTTTGTTTTT GTTTTGATAG TCTCTATCAC CCAGGCTAGA GGGCAGTGGT 180
GCAATCTTGG CTCACTGCAA CCTCCGCCTC CCGGGTTCAA GTGATTCTTC TGCCTCAGCT 240
TCCCAAGTAG CTGGGATTGC AGGCATGCAC CATCATGCCT GGCTAATTTT TGTATTTTTA 300
GTAGAGAAGG GGTTTCGCCG TGTTGGCCAG GCTGGTCTAG AACTCTTGAC CTCAGGTGAT 360
CAGACCACCT TGGCCTCCCA AAGTGCTGGG ATTACAGGCA CGAGCCACCA TGGTCAGCCT 420
TCACTTTGAG TCTGTAAACG GGAACTGCCA ATCCTTCCTC GGAGATAATG ACCCTGACTC 480
AGACTTCAGC CCACGTGTCC TCCCGATATG AGGCCCATTT TTACGAGTTC ATCACCTTAA 540
ACGAGGCGCC AAGTCACAGC GGTGTTGATG CAGGGCAGGT TCTTTGCCTG GCTCAGGAAG 600
GAATTCAAGA ACCAGCCGGT GGTAGAAGAA AACAGCTTGA TTGATGGGGT GGCACGTTAC 660
GGCTGTGACT GGCCCCGCCA TGGGCAGTGT GCTGAGAGTA GCAGCCCAGG GACAGATCTG 720
AATCCGTGCT TATTCCCATT TTTAATGACA TCCTAATTCA GGGGGCGGGT TATTCAGAAA 780
TAGCTAGAAA ATGGGCGGTA ACTTTTGAGT GTTGCCATGG CCAGAGGTGG TAACTTCCAG 840
GTGTTGCCAT GGCAATGGTA AACTGCCATG GCACTGGTGG GCGTGTCTTA GGGAGAGGTG 900
ATTTCAGCAC TTCTGGTTCA GCCAGTCTTC AATCTCGTCC AGAGTCAGTC CCTCCTGCCT 960
CCTGCCTCCG TGCTGATTGC AGGCCCTGTT 990