| Tag | Content |
|---|
EnhancerAtlas ID | HS101-27061 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr20:33116140-33117230 |
Target genes | | Number: 31 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr20:33116792-33116813 | AAAAAAAAACAAAAAGTAACA | - | 6.02 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_03424 | chr20:33116705-33117336 | Brain_Angular_Gyrus | | SE_04296 | chr20:33116055-33120012 | Brain_Anterior_Caudate | | SE_05026 | chr20:33108779-33126013 | Brain_Cingulate_Gyrus | | SE_06035 | chr20:33108332-33121511 | Brain_Hippocampus_Middle | | SE_06989 | chr20:33108326-33121553 | Brain_Hippocampus_Middle_150 | | SE_08092 | chr20:33108906-33121496 | Brain_Inferior_Temporal_Lobe |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I034528 | chr20 | 33116056 | 33121377 |
|
Enhancer Sequence | AAAAAAAAAC TACCCTACTG GAGTTTACAA AAATAACATA AACCAGTTTA TGTGAGACTT 60
GGGAGGAGAG GAGTCCACTG AGACACTGCT GCTGATAGAG CAGCGTGACC AGTGAAGGAA 120
GACCAGGACC ATGCCTGACT CACCTCTGTT CCCGTGTCAT TCACCACAGG CCGCAGAGTC 180
AGGTCAGTGA ACGTTAAATG AACCAACCAC AGTGGGTGTT GCCATCAGCC CCTTTGATTT 240
GGTAATTCTT GAGGACTGTG TTGAGAGGAA ATAATCCCAA AGGAAAAAAC CTGAAATTTT 300
TGCAAGCATG TTAGATGCCA TAATCAGTAG ATTAATAATT GTTATAATGG CTGGGCGTGG 360
TGCATGGTTG CTCACACCTG TTCTCAGCAC TTTGGGAGGC CATGGCAGGA CGATTGCTTG 420
AGCCAAGGGG TTCAAGACCA GCCTGGGCAA TGTAGTGAGA CCCCGAACTC CACACAAAAA 480
AAAGAAAAAT TAGGCAGGTG TGGTGGCACA CGCCTGTAGT CTTAGCTACT CAGGATGCTA 540
AGACAGGAGG ATTCCTTGAG CCCGGGAGTT CAAGACTGCA GTTTGCTTCA AGGCTTCTTG 600
CTCAAAGCTT TGATTGCACT CCAGCACAGA GCAAGACCTT GTCTCTTTAA AAAAAAAAAA 660
ACAAAAAGTA ACAATGAAGT GTGTAGGCCC TTCAGTGCCC AGCCCAGGGG CTGCTCCCAC 720
AGGCCAGGAT TTACCAGCAG CCCTGTGGGT GGAAGTGGTA CAGCAGTGCC TGTGTCTGTC 780
ACATGTCTGG TGTGCTGCCA GGCACGGTTT GTTTATGTGT TTCTTGGCTG CCTCGTAGGG 840
TAGACATTAT TGCGGCCACC TTTACAGACA CACTTGGACA TCCCAAGAGG TCAGGCCATG 900
CCCGGTTGCG GGGCCCCCCA AATTCTCTAG CCCAGTGTAT TCAGTGGGCT CTAATTTGTT 960
CAGTGCTCTT AGAGAGCCTC TTATGTGTGT CTTCAGTCTA GGCCTTGTTT TGGAGAAGCA 1020
GAGTTCTCGC AATTCCTACT TAAGCAGAAT GAAAGCCATC AAGGGCAACA AAGTGGAGGT 1080
GCTGTGTCCT 1090
|
