| Tag | Content |
|---|
EnhancerAtlas ID | HS101-26276 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr2:235371870-235373600 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr2:235372690-235372711 | ACTTGCTTTCTCTTTCCCCTT | + | 6.85 | | RUNX1 | MA0002.2 | chr2:235372844-235372855 | CTCTGTGGTTT | + | 6.14 | | ZEB1 | MA0103.3 | chr2:235372749-235372760 | GCGCAGGTGGG | - | 6.62 |
|
| | Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
| SE_12138 | chr2:235370493-235374385 | CD3 | | SE_15186 | chr2:235371019-235374938 | CD4_Memory_Primary_7pool | | SE_15717 | chr2:235371537-235374169 | CD4_Memory_Primary_8pool | | SE_15855 | chr2:235371599-235374628 | CD4_Naive_Primary_7pool | | SE_16669 | chr2:235371235-235374243 | CD4_Naive_Primary_8pool | | SE_17253 | chr2:235371218-235374369 | CD4p_CD225int_CD127p_Tmem | | SE_17340 | chr2:235370369-235375247 | CD4p_CD25-_CD45RAp_Naive | | SE_18338 | chr2:235370557-235375206 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19377 | chr2:235371809-235374223 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20680 | chr2:235371800-235373598 | CD56 | | SE_21778 | chr2:235372033-235373957 | CD8_Naive_7pool | | SE_21942 | chr2:235371065-235374145 | CD8_Naive_8pool | | SE_22492 | chr2:235370764-235373991 | CD8_primiary | | SE_25346 | chr2:235366664-235377811 | DND41 | | SE_30954 | chr2:235371425-235374891 | Fetal_Thymus | | SE_39425 | chr2:235371971-235374013 | Jurkat | | SE_50007 | chr2:235372122-235373223 | RPMI-8402 | | SE_55130 | chr2:235371954-235375082 | Thymus | | SE_62784 | chr2:235328691-235374533 | Tonsil | | SE_66333 | chr2:235371971-235374013 | Jurkat |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH02I234461 | chr2 | 235370631 | 235374948 |
|
Enhancer Sequence | TTGAGACTGA ATCTCGCTCT GTTGCCTGGG CTGGAGTGCA GTGGCATGAT CTCGGCTCAC 60
TGCAACCTCT GCCTCCTGGG TTCAAGTGAT TCTCCTGCCT CAGCCTCCCG AGTAGCTGGG 120
ACTACCGGTG TGTACCACCA AGCCCAGCTA ATTTTTGTAT TTTTAGTAGT GACGGGGTTT 180
CAGGCCTGAT AGGGACCCTC AGAATTGTCC TGCTGCAGGG CACAGATTCC CTGTATTCCT 240
CAACTTCCCC ACCGCTCGAG GAGTTTCTCG AACTCCTGAC CTCGTGGTCC GCCCGCTTTG 300
GTCTCCCAAA CTGCTGGGAT TACAGGCCTG AGCCACCGCG CCTGGCCTAA AATTGTATTT 360
CATTGAGTGA AATCTGTTCC TAAGGAATTG CTTTCCAATG AGATAGTCCG GGCAGTCCTT 420
TCTTCAGACT CTCCCTGACC CCATCACATA CGAGGCTTCC CTCTGACAAT GTCTGACTTC 480
CCCTTGCTCC TGGAAGGAGC TGAGGGAGGG ACATCAATTC ATTATGACAC TGGCTTTTCT 540
CAGCCTCTTG GAACCACGGG CCTACTTATG CCACCTCGGT GTTTCCCTGA GAAGATATGC 600
TTGGGCTCAA CCTGTCTGCA CTCATTTCTA ACTCCCTTAG GCTTCCTTGT GTTGGGTAAG 660
GCATTCTCCA TTTCGGTTGA ATTTTTTAAG TTTACTACTC AAAAGTATCA CTTATCAGGT 720
CCCCAAATGG TCTAGGCAAA TACGTGTTCA CATTAGCCAC TGTCTTCTAG GAAAAATTCT 780
CCTAAAGTAT TATTAAAAAT CTGCTCCTTG ATGAGTAATC ACTTGCTTTC TCTTTCCCCT 840
TCTCGTCATT GTTTACTGTG CTCCGAATGT TTGCCAAAGG CGCAGGTGGG AGCCGTTCTG 900
CGGCACGGGA GGCTTATTAT TCACGTGCAT TTCCACCGTG CAGTTGAGAA CTGATGATAT 960
CACAGCAGTG ATATCTCTGT GGTTTCTATG AGCAGAACGG ATGGAAGCGA TACACCAGGC 1020
TCATCAAACC AGACCCAGGC AAATGCAGCC CTCAGGTCAT CACGCGCAGC TCTCTTCTGC 1080
TGGTGTCTGC AAAGCATTCT AAGAGCCTGG CTTGAAAATG CTTAAAAGCG CAAGGTGTAC 1140
GTTTTCAGAA CAAAATTAAT CCACCCAGTC TGCACAAACA GCTCCAAGAT CTTCTGCGGT 1200
ATAATTGACA TATAAGTCAC AATCATAAAA GTGAATCAGC CACGTCCCTG AAACACAGTC 1260
GGAGATGAGG TGCTAACTTC TTGAAGTGGC TGCATGAGTT TTCTTTGGCT GCTGTAACAA 1320
ACCATCACAT CAGTGGCTTA AACAACCCGA ATCTATTAAA AGTCCAACGC AGGTGTCGCT 1380
GAGCTAGAAT TGAGGTGTCA GCAGGCCTGT GTTCTTTCTG AAGAATGCAG GGGAGAAGCT 1440
GTTTCCTTAT CTTTTCCAGC TTCTAGGAAC CACCCATCTA TTTTGACTCG GGGCCCCTCT 1500
TCCACCTTCA AAGCCAGCGA TGGTGCCTTC CCCTGCCTTC CTTCCAGAGC CCTCTCTCCC 1560
TCTCCAGTTC TGCTGCCCTC TAATCCTTGT AGGATCCTTA AACATTGGGC CCATTTGGAC 1620
AATTCAGAAT AATCTCTCTG TTTTAAAGTC AATTAGTAGC TTTAATTTTA TCCACAGCAT 1680
CAATTTCCCT TTCCATGTAA TGTAACACAC ACAGAGATTT TAGGGCCTGT 1730
|
