EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-21645

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr19:39521140-39521660

Target genes

Number: 33
Name	Ensembl ID

SPINT2	ENSG00000167642
C19orf33	ENSG00000167644
YIF1B	ENSG00000167645
KCNK6	ENSG00000099337
CATSPERG	ENSG00000099338
PSMD8	ENSG00000099341
GGN	ENSG00000179168
FAM98C	ENSG00000130244
RASGRP4	ENSG00000171777
EIF3K	ENSG00000178982
ACTN4	ENSG00000130402
CAPN12	ENSG00000182472
LGALS4	ENSG00000171747
ECH1	ENSG00000104823
HNRNPL	ENSG00000104824
RINL	ENSG00000187994
NFKBIB	ENSG00000104825
SIRT2	ENSG00000068903
CTC	ENSG00000262484
MRPS12	ENSG00000128626
FBXO27	ENSG00000161243
NCCRP1	ENSG00000188505
SAMD4B	ENSG00000179134
AC005239.1	ENSG00000241983
PAF1	ENSG00000006712
MED29	ENSG00000063322
ZFP36	ENSG00000128016
PLEKHG2	ENSG00000090924
RPS16	ENSG00000105193
SUPT5H	ENSG00000196235
TIMM50	ENSG00000105197
EID2B	ENSG00000176401
EID2	ENSG00000176396

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXH1	MA0479.1	chr19:39521154-39521165	TCCAATCCACA	+	6.62
IRF1	MA0050.2	chr19:39521254-39521275	CTTTTCTTTCTTTTTTTTTTC	+	6.07

Enhancer Sequence

CTCATCTTCT GTCTTCCAAT CCACATCCTT TTGGGCATGA GCAGAAAGTG TGTACTCTGC 60
TAATTACTAG AACTGTGAGT GTGTTTTTCA CTTCACCTCC CTGAACTTCA GTTTCTTTTC 120
TTTCTTTTTT TTTTCCAGGA CTGAGTCTCA CTCTGTCGTC CAGGCTGGAG TGTAGTGGTA 180
CAACCTCCAC CTCCTGGGTT CAAGTGATTC TCCTGCCTCA GCCTCCCAAG TATGTGGGAC 240
TACAGGTGTG CACTACCAGG CCCGGCTAAT TTTTTTTTTG TATTTTTAGT AGAGACGAGG 300
TTTTGCCATG CTGGTTGGGC TGGTCTCGAA CTCCTGACCT CAAGTGATCT GCCTGCCTCG 360
ACCCCCCAAA GTGCTGGGAT TATAGGTGTG AGCCACCATG GCTGGCCTGA ACTTCAGATT 420
TTTTATCTGT AAGGAGGGGT TAGGAGGCCT AAATTAAGTC ACCCATAAAA AGGCCATGTC 480
ACATGCAGTC AGTGCTTAGC AAGGGGCTAT TTTAATCGTC 520