Tag | Content |
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EnhancerAtlas ID | HS101-21236 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr19:18130570-18133730 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | + | 6.44 | MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | - | 6.44 | Nr2f6(var.2) | MA0728.1 | chr19:18130678-18130693 | TGAACTTCTGACCTC | - | 6.38 | RARA | MA0729.1 | chr19:18130675-18130693 | TCTTGAACTTCTGACCTC | - | 6.88 | RREB1 | MA0073.1 | chr19:18132340-18132360 | CACCCCCCCACCCCCCACCT | + | 6.22 | RREB1 | MA0073.1 | chr19:18131314-18131334 | GGGGTGGGGGTGGGGGTGGG | - | 6.27 | RREB1 | MA0073.1 | chr19:18131320-18131340 | GGGGTGGGGGTGGGAGGGGG | - | 7.19 | SP3 | MA0746.2 | chr19:18133699-18133712 | CACCACGCCCACC | + | 6.48 | SP8 | MA0747.1 | chr19:18133700-18133712 | ACCACGCCCACC | + | 6.32 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_03528 | chr19:18130671-18131169 | Brain_Angular_Gyrus | SE_03528 | chr19:18131311-18133631 | Brain_Angular_Gyrus | SE_04156 | chr19:18130327-18135495 | Brain_Anterior_Caudate | SE_05027 | chr19:18129368-18135719 | Brain_Cingulate_Gyrus | SE_05917 | chr19:18129420-18135750 | Brain_Hippocampus_Middle | SE_07191 | chr19:18123490-18135726 | Brain_Hippocampus_Middle_150 | SE_08048 | chr19:18129556-18135507 | Brain_Inferior_Temporal_Lobe | SE_11531 | chr19:18130225-18136150 | CD20 | SE_17546 | chr19:18130687-18135928 | CD4p_CD25-_CD45RAp_Naive | SE_32095 | chr19:18130664-18133651 | Gastric | SE_33722 | chr19:18132360-18135625 | H2171 | SE_41200 | chr19:18130424-18135677 | Left_Ventricle | SE_42935 | chr19:18130491-18135643 | Lung | SE_48098 | chr19:18117499-18135641 | Psoas_Muscle | SE_48877 | chr19:18130441-18133652 | Right_Atrium | SE_50498 | chr19:18130482-18133715 | Sigmoid_Colon | SE_51440 | chr19:18125584-18135837 | Skeletal_Muscle | SE_55387 | chr19:18131327-18132959 | Thymus | SE_55387 | chr19:18132966-18133608 | Thymus | SE_61722 | chr19:18124231-18170119 | Toledo | SE_65475 | chr19:18130282-18133763 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 6 | Chromosome | Start | End |
chr19 | 18131787 | 18132922 | chr19 | 18133045 | 18133309 | chr19 | 18131991 | 18132570 | chr19 | 18131070 | 18131394 | chr19 | 18130949 | 18131445 | chr19 | 18131379 | 18133644 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018019 | chr19 | 18130584 | 18136229 |
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Enhancer Sequence | TGCCTTGGCC TCCTGACTAG CTGGGATTAC AGGCACCCAT CACCACGCCC AGCTAATTTT 60 TGTATTTTTA GTAGAGACAG GGTTTCACCA TGTTGCCCAG GCTGGTCTTG AACTTCTGAC 120 CTCAGGTGAT CTGCCCATCT TGGCCTCCCA AAGTGCTGGG ATTACAGGCG TGAGCCACCA 180 TGCCCAGCTC AGATGAAGAT TCTGATGGGG GTGGAGGTGT CATCCCTTGC ACTTGCTCCC 240 AAGACCTCCT AGAGTCAGAC GTGTCCCCCA TGCAGAGTCA AATGCTAGGT CTCTATCTCT 300 CAGTGTCTCT GTCTGTTTCA TTCTGACTCT CACCATCTTT TCTTTCCCAT CTCTGTCTCT 360 CTCTCAATAT CTGTCTTGCT TACTGTCTCT GTCTCTGTCT CTCAGTCTTA TTGCCTCTGT 420 ACTTCTGTCT CTTTCTCCCT GTCTCTGTCT CCCTCTGCCT CTGATTCTCT CACTATCTCT 480 CTTGGCTACC ATCTCTCTGT CTCTTTGGGT CCCTGACTCT CTCACCATCT CTGCCTCCTG 540 CCCTGGCCCG GCCAGCTGGG GGACAAGGGG TGACAAGCAG TCAGGGCGCC CGCTGCTTGT 600 TTTCCCACCC ACGCTGGCAG GGAGCCCAGC CCAGCCGGGC CACTGTTCAG GAATCCTCCA 660 GCCTCCCCGC TCCAGCCACC AGGCGCGGCC ACCGCCAGCC TCTCCTCCCA GCACATTCTG 720 TCCCAAGCAA AGAGCGCCAG AGATGGGGTG GGGGTGGGGG TGGGAGGGGG ACGCATTCCT 780 GCTGAGCTCC AGTTACAGGA CAGCTTGTCC TGGTGGCCCC ACCAGCACAA CCTCCTGATG 840 GCTCCCCATC CTGCTGTGGG GTTAGACCTT CCTGAATGAA GCCAAAGCCC CTCTGCCAGT 900 TCGTGCCCAC CTCAGGGCCT TTGCACCAGC CATACCTTCC ACCTGGCACT CTGTCTCCCT 960 AGATCTCCCC AAGACCTCCT CCGCCTGCAC ATCTGAGACC TCACATCACC TTCTCAGCAA 1020 GTCCCCTCTG TCCCTAGGCC CGGGCACCCC AAATTCCCCT CCTGCTGCCC CAGTGCATTT 1080 AATTTCCTGG TCCTCCCCAT GTCCCTGGGG TTACATATTC ACTTGTTTGT TGATGTGGTG 1140 TCTATTACAC CAGGTCCCCA CTGTGTCCCA GCACCCTGAA CACACAGTAG GTGGCTTAGT 1200 GAAGGTTTTT ACAATTGACA TCTATTCCTC CCAAAGCTCA GCCCGCCCAG GCTCATCCAT 1260 GTGGATCCAC AGTTCTGACC ACCCCACCTC TGCCTCACCC TGCCTCCGCC ACCCCTGCAC 1320 CCTAATGCAG CAGGATTTCC CAAGCCCCCC TGCCTTGGCC CAGGGAGTTA TCTCCACCAG 1380 ATCCACCTTT CTGAGCGAGG AGCTGGGTGC ATTGAGGGGC AGGGGCGGCT GGAGTTCAGA 1440 TGCACCTTTT GAGCGAGGGG CTGGGCCTCT CTGTCGCTGG GCTCCAGGCA CAGGGCAGTC 1500 ATGATGTACA CACACACGTG CAAACACACA CGCACACACA TAAGCCTGTC AGCAACATAG 1560 AAACACCAGC CAGTGAACTC GGGCACAAGC AGCCGGGCAC AGAGTGTTCA CCAGGTGCTC 1620 ACATGTGGAG TACCCCAACT CCTAGGAGGA TGCGGTTATG GCCTGGATCC TACAGGTGGG 1680 GCCCAGACAT GGGCTTTGAA CCCACGCCAG GGTATGCACA AACCTATCCA AACACACGCG 1740 TGTCTGCCCT AGCTTCCCTC ACCCGGGAGT CACCCCCCCA CCCCCCACCT TGTTTTTGAT 1800 GTTCAGGAAA GTCCCCAGAA AGCACTGGGC CCGGGCAAGG GGCCAGGAGG AAATGGTGAC 1860 TCAGCCGGTG GCCATCAGTG CCTGCCACGC TGGGCTGGGT GGACTGCGCG GCCCGATCTG 1920 GGAGGATCCA CAGAAAACAA CAATAAAAGA TGAGGGCGTG GGTGCGGGGT AAAAAGGACT 1980 CAGCCCAAGA ATGATCAGAG AGGGGATGGA TCCCCCTGTG CTCCAACACT TCAACCCTGC 2040 TGGGCCTGAT TGACAAGTGG GGAAACTGAG ACACAGGGAA CAAGTGACTT CGCCAAGGCC 2100 CACCAGCCAA GATGGTACAG GCAAGGGGAT CCCTAAGTCC TTAACACAGG GGTCTGGAGG 2160 AATGTCTACC TGCCCTGCCC TTTTTTTTTT TTTTTTTTTT GGAGACAGGG TCTCACTCTG 2220 TCCGTCAGGC TGGAATGCAG TGGCATGATC TCAGCTGACT GCAATCTCCG CCTCCTGCCT 2280 CAGCCTCCCA AGTAGCTGGG ATTACCGGCG CCTGTCCCTA TGCCCAGGTA ATTTTTGTAT 2340 TTTTAGTAGA GATGGGGTTT CACCATGTTG GCCAGGCTGG TCTCAAACTC CTGACCTCAG 2400 GTGATCTGCC CACCTCGGCC TGCCAAAGTG CTGGGATTAC AGGCGTGAGC CACAGTGCCC 2460 GGCTCCCTGC CCCACTTTCT GAGACCCAGA TCCACTTCCT GGTTTCCTGT GTGGTCATGT 2520 GACCACACTT GGCCAATTGG AGCCTTTTGT TATCACAGGC ACAGGGATTG GGTCAGGGCT 2580 GGGCACGTGA TCCTGCCTGA GCCAATCATG CTACGAGTTT GGAGACTCCC TGGAAGAAGG 2640 CCTAGAAGTA AGGAAAACCA TCTTGGACGC ATGATGATGG CAGTGGATCA GAGTCCCAAG 2700 GACACTGGTG AAGATCAGAG CAGGACTCAC ACAACCTCAG ATCCCTGTGG AGTCAGGGTG 2760 GAACCAGAGG GAAGGCTGAA GGCTGGAGGG TCCTGAGAGG CCTTGCAGAA AGAGAGGACA 2820 TTGGAGCTGG GGCTTTGATG GATGAAGAGG AACTAGGGAA AGGCATTTCA AGCAGAGGGA 2880 ACAGCCTGTG CAACCACAGC AGGCAGGTGG GAGCTAGGCG TGTCCTCAGC CACCCCAGTG 2940 GCCCCATGGG GCTGGAGCAT AGAGAGGCAT CTGCAAATGT GTTTATTTGT TTATTGAGAC 3000 GGAGTTTTGC TCTTGTTGCC CAGGCTGGAG TGCAGTGGCG CAATCTTGGC TCACTGCAAC 3060 CTCCGCCTCC CGGGTTCAAG CGATTCTCCT GTCTCAGTCT CCTGAGTAGC TGGGATTACA 3120 GGCGCACGCC ACCACGCCCA CCTAATTTTT TGTATTTTTA 3160
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