EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-21039

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr19:10869520-10870410

Target genes

Number: 21
Name	Ensembl ID

EIF3G	ENSG00000130811
MRPL4	ENSG00000105364
FDX1L	ENSG00000167807
RAVER1	ENSG00000161847
TYK2	ENSG00000105397
CDC37	ENSG00000105401
KEAP1	ENSG00000079999
ATG4D	ENSG00000130734
KRI1	ENSG00000129347
CDKN2D	ENSG00000129355
AP1M2	ENSG00000129354
SLC44A2	ENSG00000129353
ILF3	ENSG00000129351
QTRT1	ENSG00000213339
DNM2	ENSG00000079805
TMED1	ENSG00000099203
C19orf38	ENSG00000214212
YIPF2	ENSG00000130733
C19orf52	ENSG00000142444
LDLR	ENSG00000130164
KANK2	ENSG00000197256

dbSUPER

Number of super-enhancer constituents: 19
ID	Coordinate	Tissue/cell

SE_01011	chr19:10869886-10870691	Adrenal_Gland
SE_03312	chr19:10869790-10870244	Brain_Angular_Gyrus
SE_04087	chr19:10869617-10870629	Brain_Anterior_Caudate
SE_04989	chr19:10869289-10871189	Brain_Cingulate_Gyrus
SE_05916	chr19:10869208-10871211	Brain_Hippocampus_Middle
SE_06944	chr19:10869445-10870736	Brain_Hippocampus_Middle_150
SE_08009	chr19:10869725-10870977	Brain_Inferior_Temporal_Lobe
SE_11457	chr19:10864897-10877892	CD20
SE_14773	chr19:10869314-10871611	CD4_Memory_Primary_7pool
SE_23074	chr19:10869541-10871660	Colon_Crypt_1
SE_23814	chr19:10869538-10869859	Colon_Crypt_2
SE_23814	chr19:10869884-10870758	Colon_Crypt_2
SE_24803	chr19:10869760-10870709	Colon_Crypt_3
SE_31454	chr19:10869651-10871415	Gastric
SE_42575	chr19:10869402-10871577	Lung
SE_47653	chr19:10870123-10870386	Pancreas
SE_50068	chr19:10869393-10871663	Sigmoid_Colon
SE_52382	chr19:10869387-10871667	Small_Intestine
SE_53539	chr19:10869398-10871720	Spleen

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I010757

chr19

10868478

10878291

Enhancer Sequence

GCCAGGATAT GTACTTTTCT TAAACAGCTC TGTCGAATAG TAATTTACAT TCCGCGAAAT 60
CGATCCATTT CAGAATTAGT GGTCTTTAGT CATTTTACAG TCCTTTTTTT TTTCCCACAC 120
AGAGTCTCGC TCTATTGCCT AAGCTGGAGT GCAGTAGTGC AGTCATGGCT CTGTACAACC 180
TCAGCCTCCC GGGCTCATGC CATCCTCCTC TCTCAGCCTC TCTAGTAGCT GGGATCACAG 240
GCGTGGGCCA CCACGCCCAG CTAATTTTAG TTTAGTTTAG TTTAGTTTAG TTTTTGTAGA 300
GATGGGGTCT TACTATCTTG TCCAGGCTTT TACAGTTAAT TTTAGTAAAC ATCACCATAG 360
TCCAGATGTA GAACATTTTC ATCACCCCAG AAAGCTCCTT CCCCTCCATT GGCAGTCACC 420
CCCGTTCCCA CATCCAGGTA TCCACTGATC TGCCTTCTGC TTCTGTAGAT GTGACTTTTC 480
TGGACATGAA ACACATCCTA TTTTGTCATC AATAACTTTC CTCGTATTTT ACCCATATAC 540
ATGTGGCATT GTGTTGATTT AAAACACATA GGAAATGTGT TGATCTCCTG GGTATGGGGG 600
AAATTTAACA AATACATGCC AGGGAATGGG CCCCCTGGGA GTACGGGGGG TGGGGCACAG 660
CCTGCCAGAG GGAAATGGTT CTGGTCACTA TGACCTTCCA TGCATACCTT CCTGAGCTCT 720
TCAGGCCTCA GGACCCTCCA AGACCAGAGC ATTCCCCAGG GCCCAGCTGG GGTTGGTGCC 780
TTTGCTGAGG TCGCCCAAAT TGCAAGACAG AGTTGCTCCA CCACATGTGG TCACACTTCC 840
TGCCCCTCGA TCCGGACGCA AGAGTAATTT CTGTCCCTCT CCCCCCCTCA 890