Tag | Content |
---|
EnhancerAtlas ID | HS101-20713 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr19:1184280-1186030 |
Target genes | Number: 30 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
ESR2 | MA0258.2 | chr19:1185039-1185054 | GGGGCTCTGTGACCT | - | 6.14 | IRF1 | MA0050.2 | chr19:1185973-1185994 | TTTTCCTTTCTTTTTTTTTTT | + | 6.36 | Nr2f6(var.2) | MA0728.1 | chr19:1184437-1184452 | TGAACTCCTGACCTC | - | 6.22 |
|
| Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
SE_34735 | chr19:1182619-1186321 | HeLa | SE_36707 | chr19:1183111-1184542 | HMEC | SE_47328 | chr19:1182994-1185105 | Panc1 | SE_62700 | chr19:1151017-1215145 | Tonsil |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 1184711 | 1184761 | chr19 | 1185536 | 1185743 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I001179 | chr19 | 1179721 | 1186563 |
|
Enhancer Sequence | CGATTTCGGC TCACTGCAAC CTCAGCTTCC CGGGTTCAAG TGATTCTGTC GCCTCAGCCT 60 CCCCAGTAGC TGGGATTACA GGCGCCTGCC ACCGCGCCCG GCTAAATTTT GTATTTTTAG 120 TACAGACAGG GTTTCGCCAT GTTGGCCAGG CTGGTCTTGA ACTCCTGACC TCAGGTGATC 180 CACCCGCCTC AGCCTCCCAA AGTGCTGGGA TGACAGGCGT GAGCCACAGT GCTCAGCCCA 240 GGCCAGCATC TACAGGGCAC AAGTGGGAAT CTGGGTTCTA GGAGGTGAGA ACTGGGGGGT 300 GGGGGGTTGC AATGGGTGGA GAGTGCTTTC CCTTCCCTGC AGGCCTTCTC ACGTCCACAG 360 GGTTGCAAGC GGGACTGGCA GAGTTGAAAC AAAAGTCAGG GAGCAGGGCT GGGCGCAGTG 420 GCTCAAGCCT ATAATCCCAG CACTTTGGGA AGCCGAGGGA GGCTGATCAC CTGAGGTCAG 480 GAGTTCGAGA CCAGCCTGGC CAACATGGAG AAACCCCGTC TCTACAAAAA ATACAAAAAT 540 TAGCCGGGCT TGGTGGCGGG TGCCTGTAAT CCCAGCTACT CGGGAGGCTG AGGCTGGAGA 600 ATTGCTTGAA CCTGGGAGGC GGAGGTTGCA GCGAGCCGAG GTCGCACCAC TGCACTCCAG 660 CCTGGGTGAC AGAGCAAGAC TCCATCTCAA AAAAACAAAA GAGGAGTGTG GGAACAAGTA 720 GTGAAGATTT CCACCGTTCA AATCCCGCCA CTCCCCCCCG GGGCTCTGTG ACCTCAGGAA 780 GGCACATGAC CTCCCACACT TCAGTTTGCC CATCTATAAA ATGAGGATAA TCGTGGTACC 840 TCCTTTGGAA GCCTTTTGTG AGAATTTGGT AAGTTCTGGT ATGTGTTAAG TGTTTGGAGT 900 GGGGCTTGGG GTATGGTGAA GAGTTTATAT TAAAAAAAAG AAAAAAAACC TTCAAGTTGG 960 GCATAGTGGT GCACGCCTGT AATCCCAGCA CTTTGGGAGG CCGAGGCGAG CAAATCACTT 1020 GAGGTCAGGA GTTTGAGATC CACCTGGCCA ACATGGTGAA GCCCTGTCTC TAGTATAAAT 1080 ACAAAAATTA GCCGGGGGTG GTGGTGCACA CCTATAGTCC CAGCTACTGA AGAGGCTGAG 1140 GCAGGAGAAT CTATTGAATC TGGGAGGCAG AGGTTGCAGT GAGCTGAGAT CGCGCCATTG 1200 CACTCCAGCC TGGGCGACAG AGCCAGACTC CACCTCAAAA AAAAAAAAAA AAACAAACAA 1260 GAATCGTTTG GTTGCAGCTG ACAGAAATTG AAACTACAAC TGGCTCCTTT TTAAAAAACA 1320 GGAATTTTTT GCTCATGGAA CTGAAAGATT TAGGGATAGA GCTAACTCAA GGCCACCCCT 1380 CTCAGCACCG TTGATGTTCT GGAAAGGACC ATTCACTAGG GTGGGGGCCG TCCTGGGCAC 1440 ACAGGGTGCT CAGCAATGAC CCTGGCCTCC ACCCAGTCAA CGTCTGTAGC GTCCCCACCC 1500 GGTCATGGTG ACCAAAAACA TCTCCAGACA TTGCTGAGTG TCCCCTGGGG GTGTAATCAC 1560 CCTTGGTTGA GCCCTACTGG TCTGGCGGGT TTCAGACACA GCTGGATCCA GGACCCTCGG 1620 TCAGTGTCAC AAGGATGTGT CCAATTCTCC ATCTCTTAGC ATTGCCATCC CCTCTCTTGG 1680 CTTTTTTCTT TTCTTTTCCT TTCTTTTTTT TTTTTTTTTT TTTTTTTTGA GACAGGGTCT 1740 CGCTCTGTCA 1750
|