| Tag | Content |
|---|
EnhancerAtlas ID | HS101-20143 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr18:19247610-19249350 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr18:19248170-19248191 | AAAAAAAAAAAGAAAGAAAAA | - | 6.59 | | IRF1 | MA0050.2 | chr18:19248176-19248197 | AAAAAGAAAGAAAAAGAAAAG | - | 6.5 | | MAFG | MA0659.1 | chr18:19248263-19248284 | ATCATCCTTACTCAGCATTTT | - | 6.24 | | Nr2f6(var.2) | MA0728.1 | chr18:19247945-19247960 | GAGGTCAAGAGTTCG | + | 6.24 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH18I021667 | chr18 | 19247718 | 19250316 |
|
Enhancer Sequence | CGTTAACCTG ACAATATTTC CGATGGCTAA CATTTATTGG ATCATTAAAT TTGTGTCCAC 60
AAAACCCTGA GGAAGATCCC AGTGTATCTA TTTTATAAAT GAGGAAACTG AATTTAGAGA 120
GGTTAAATAA CTCCTGTAAC ATCTTAACAG CTACTAACTG ACTATGCTCC GACACTTAAA 180
AAAAATACTT TTTGATTGAA TGCACGTCAA TCACAAGGGG CGGGGGGCAC AAATTCAACG 240
TAAAATCTAA ATAGAAAATA TCTTCTAGTG GCCAGGGGTG GTGGCTCACT CCTGGAATTC 300
CAACACTTTG GGAGGCTGAG GCTGGTGGAT CACCTGAGGT CAAGAGTTCG AGACCAGCCT 360
GACCAACATG GTGAAACCCC ATCTCTACTA AAAATACAAA AATTAGCCGG GTGTGGTGGC 420
AGGCACGTGT AGTCCCAGCT ACTCAGGAGG CTGAGGCAGG AGAATGGCAC GAACCCAGGA 480
GGCAGAGCTT GCAGTGAGCC GAGATCACAC CACTGCACTC CACCCTGGGC AACAAAGCAA 540
GAATCTATCT CAAAAAAAAA AAAAAAAAAA AGAAAGAAAA AGAAAAGAAA ATATCTTCTA 600
CTATGCTCAT TCATAGTGAC TTCAGAATTT GTCATGAGAA CCTGGGTGAT GAAATCATCC 660
TTACTCAGCA TTTTTATTGC AGGTGAGTCT ATTCACACTG CACAGCTTTA AAATTTCTGA 720
ATTATTTATG AATAGTCCCC AATATATATT CTTATTATAT AGGCTTTAAC TATATGTGTA 780
TATGTAAGAA TGCATACATA TAGACACATA CAGAGTTAGG GCATAAGAAA AATGCCCTAA 840
GGAAAATTGC TAGGATCACA GAATCTTTGT GTCAAAAGGA CCATAGATGT CACTTGGTTC 900
CTTATTTACA CATAAGGAAA TTAAGGCCTG GCAAGGTTGA GTAATTTGCC AAAGGTCACA 960
AAGTAGCAGA GCCTGCGTTA TATGTTTGTA ATAAGAACCT AATTCTTGTA AAGCACCAGG 1020
GTTCCATGAG GTATACAGTG AATAAATCAT TATCTGGTAC CCTCAGATAT AGGGGCTGAT 1080
TTTTCCCTAA ACGTTTTTCT CCAAATAGAT TGCATTAAGA TCAACACTGA TAATATTGCC 1140
AATGAAGGAG TGTGGATTTC TGGCACTGCC TTCATTCTAG ATAAAGCACT ATACAATCTG 1200
ACATATTATT TTCTTTTATA ATAGTATAGC CGTATAGCCC CAGCTGTGCT ACACTGCAAT 1260
AGACACTTAA AATGTTAAAA TATGTAAAGC TAGGCAGGTG TAGTGGCATA TGCCTGTAGT 1320
CCCAGGTACT CGGGAGGCTG AGGTGGGCCA ATCGCTTGAG CCCAGCAGTT GAGAGCACCC 1380
TGGGCAACAC AGCAAGACCC CTGTCTCTAA ATTAAAAAAC AACAACAACA AAAAAAACCC 1440
ACACCCAAAA TTAGCCAGGT GTGGTGGAGG ATCACCTGAG ACTGGGAGGT AGAGGCTGCA 1500
GTGAGCTGTG ATCATGACAC TGCACTCCAG CCTTGGTGAC AGACTGAGAC TCTGTCTCAA 1560
AATGAGTAAA TAAACTATAT AAAGCTCCTT ATGCCTCAAT ACATAATGAT CCAATGGTAA 1620
AGATCGACAG TTTCCAGAAC TCTGAGATTC AGCAAATCTA GAACCTTTCC ATCATAGTCG 1680
GCCTCCTGCT AGCTCCTCCC CTGGCGGCTC TGCTAGCTTT CCATTTCCTA CCCAGTCTCT 1740
|
