Tag | Content |
---|
EnhancerAtlas ID | HS101-18191 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr17:27991130-27993680 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GATA2 | MA0036.3 | chr17:27992747-27992758 | ACAGATAAGAA | - | 6.14 | Gata1 | MA0035.3 | chr17:27992747-27992758 | ACAGATAAGAA | - | 6.62 | Nr2f6(var.2) | MA0728.1 | chr17:27993484-27993499 | GAGGTCAGGAGTTCA | + | 6.22 | Nr5a2 | MA0505.1 | chr17:27991181-27991196 | GAGTTCAAGGCCAGT | + | 7.4 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_00091 | chr17:27991446-27993306 | Adipose_Nuclei | SE_07345 | chr17:27991825-27993095 | Brain_Hippocampus_Middle_150 | SE_09243 | chr17:27991431-27993650 | CD14 | SE_10996 | chr17:27991386-27993744 | CD20 | SE_41508 | chr17:27991721-27993440 | Left_Ventricle | SE_43139 | chr17:27992320-27993414 | Lung | SE_48078 | chr17:27991293-27993508 | Psoas_Muscle | SE_51084 | chr17:27987250-27996474 | Skeletal_Muscle |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I029664 | chr17 | 27991493 | 27993352 |
|
Enhancer Sequence | GGCTCATGCC TGTAATCCCG GCACTTTGGG AGGCTGAGGC GGGAGGATCA GGAGTTCAAG 60 GCCAGTCTGG CCGACATAAT GAAATCCCGT CTCTACTAAA AACACAAAAA ATTAGCCAGG 120 CGTGGTAGTG TGTGCCTTTA ATCCCAGCTA CTTGGGAGGC TGAGGCAGGT GAATCGTGTG 180 AACCTGGGAG GTGGAGGTTG CAGTGAGCTG AGATCATGCC ATTGCACTCC AGCCTGGGCG 240 ACAGAGCGAG ACTCCGTCTC CAAAAAAAAA AAAAAAAGAT TGGAAGGCAA TATTATATAA 300 TAAAAGATGA TGGTGATTAT CAGTCTTGAT GATTAAATAA ATATGATAAT CTGTTGTCTT 360 CTAAAATTTT TAAAAATGAA CATGGATTAT CATTATTTTT AGACAGGCTC TCTCTTTGTT 420 GCTCAGGGTG GAGTGCAGTG GCATGATCAT GGCTCACCGC AGCCTCAAAC TCCCAGGCTC 480 AGGTGATTCT CCTGCTTTGG CCACCCCAAG TGCTGGGATT ATAGGTGTGA GCCACCACAC 540 CTGGCCAGAA TTATTTTTTT AATAAGAAAA AAACTCAAGA CAGAAGATTA TACCTGACAA 600 TAATGAAATC ATGGTATTAA TCTACTGGCA CAAATGCTCA AATGCATTTG TAGTTGATTA 660 GAGAAATGTA ATTTTGGGGA AATTAGATTG TTTTTTCTGC TTACAATACT ATTAAAATTT 720 GCTTGCATGG CCTAAAATAT ACCATTTGAG GAGTAGTTCT TGAGTGGGTG GCACCAGAGA 780 CACAGGGAAG CATGCATGAA ATAAAACAGG TTGATCAGTC AGAATCTGAC TGTATTTCAT 840 ATTTATCATG TCTATATTCT TTTACGTGTT AAAAGTCAAG CTCAATGGGA AACTTGACTT 900 TCAAGTTTGC AGCTTCAGTC ACATGAGCTC CTTTTGACTA CAGATATTTG TCCTTCATAA 960 AAATTAGTCT CAGGGAAACA GTTGGGAGGG CCCCATAGAA CGAGTGACTC ACAAGTTTTC 1020 TATAGATAAC ACAAAGATTC TTTCCAATAA TACAAGAGCA GGATATATCT GAATCCTTGT 1080 GGAAGTATAT GTAAGAGACA ACAAAGCCAG GTGTCTTGCA AATGGAAAAG CCAATGACAG 1140 TTTTGCAGTA TGATCTACAA CCAGAAATGC CAACACATAC TGGTCAGTTA AAGTAATGGA 1200 AAAGAAGTCC CCCTCCCAAC TCACAGCTTT TCATGAGTAA TTTCATAGCT AATATACCAC 1260 TATGAATCAC TCTAGACACA TATATCCTAG AGTGTCAACA AGTTATTTCA GGGCACAAGC 1320 CTTCAAAGGC ATAGTCTGAG TGCCTCATGA AATAAACTCT TGAATATTCA GAGTGAGGTG 1380 GATCCAGTTT AGTCAGTTCC TGAGCATTTA TTCTCCTTCT CTTCTGTTTC CCAGCTTCTA 1440 ATCATTTCAC AGTTCATAAA CGTCCTCAAG AAGAGAAAGG AAGTGAAATT CAAACCAACT 1500 GATTTACTTC CTTGTAAGCA TTTTTGGTGA AAGTGTGTGG GAAGTGGACA CAAAATGAGG 1560 TTTTGGCATT CTCCATTGAT TTTAATTATT CTTGTTAACT TTGTTCCCAC TAAATGTACA 1620 GATAAGAACT AAAACTCTAA CACTTGAGAG AAAAATAGAC TTTAGAAGCT TTCAAAATCT 1680 ACCTGTCAGA GAGGTCTCCT TGGGCTAATT ACAAAAGGTC ACTAAATGTT CAGGAACCAT 1740 GAAGAACAAT TTTTAGTCAC CAATTTTTTG GTAATCATAA AAGTAGGGAC TCAAAGTGTA 1800 GCTACAAGGT TTCATATGTT TGAAAGTCCA GTAGTCTCTT GTCTCTCAGT TATATAGTAG 1860 CTCCCACCAG CTCTGCTCAG ATATATCAGA ACTTAGACAC ATTTGGCAGA TTTGAGAGTG 1920 ATCTTAAAGG ATCATCCTAT TTGGGGCCAG GCGCGATGGC TCATGCCGGT AATTTGGGGC 1980 CAGGTGCGAT GGCTCATGCC TGTAATCCCA GCACTTTGGG AAGGACTAGG TGAGTGGATT 2040 GCTTGAGCTC AGGAGTTCGA GACCACCCTG GGAAACATGG TAAAACCCCA TCTCCACAAA 2100 AAATACAAAA ATTAGCTGGG GGCTGGTGGC ACACGCTTGT GGTCCCAGCT ACTCAGGAGG 2160 CTGAGAAGGG AGAATCACTT GAGCCTGCGA GGCTGAGGTT GCACTGAGCT GAGACTGTGC 2220 TACTACACTC CAGGCTGGGC AACAGAGCGA GACCCTGTTT CAAAAATAAA AATAAAATTA 2280 AAAATGAGGG CCAGGCATGG TGGCTCATGC TTATAATCCC AGCACTTTGA GAGGCCAAGG 2340 CGGGCAGATC ACCTGAGGTC AGGAGTTCAA GACCAACGTG GCCAAGATGG CAAAACCCCG 2400 TCTCTACTAA AAATACAAAA ATTAGCTGGG TGTGGTGGTA TGCACCTGTA GTCCCAGCTA 2460 CTCGGGAGGC TGAGGCAGGA GAATTGCTTG AACCCGCGAG GCAGAGATTG TAGTGAGACG 2520 AGATCGTGCC ACCGCACTCC AGCCTGGGCG 2550
|