EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-10315

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr12:50690280-50692440

Target genes

Number: 22
Name	Ensembl ID

RP11	ENSG00000257954
MCRS1	ENSG00000187778
PRPF40B	ENSG00000110844
TMBIM6	ENSG00000139644
FMNL3	ENSG00000161791
NCKAP5L	ENSG00000167566
BCDIN3D	ENSG00000186666
FAIM2	ENSG00000135472
AQP2	ENSG00000167580
AQP5	ENSG00000161798
AQP6	ENSG00000086159
RACGAP1	ENSG00000161800
ASIC1	ENSG00000110881
SMARCD1	ENSG00000066117
GPD1	ENSG00000167588
COX14	ENSG00000178449
orphan	ENSG00000257755
CERS5	ENSG00000139624
RP3	ENSG00000257298
FAM186A	ENSG00000185958
DIP2B	ENSG00000066084
ATF1	ENSG00000123268

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr12:50690467-50690479	TTTATTTTTAGC	-	6.04
MEF2C	MA0497.1	chr12:50690466-50690481	TTTTATTTTTAGCAA	-	6.33
Nr2f6(var.2)	MA0728.1	chr12:50690515-50690530	TGAACTCCTGACCTC	-	6.22
PHOX2A	MA0713.1	chr12:50692162-50692173	TAATTTAATTA	+	6.62
PROP1	MA0715.1	chr12:50692162-50692173	TAATTTAATTA	-	6.32
PROP1	MA0715.1	chr12:50692162-50692173	TAATTTAATTA	+	6.62
Phox2b	MA0681.1	chr12:50692162-50692173	TAATTTAATTA	+	6.62
REL	MA0101.1	chr12:50690963-50690973	GGGGATTTCC	+	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH12I050298

chr12

50691941

50692090

Enhancer Sequence

AAAAAGGCTG AATCTTTTTT TTTTTTTTTT TTTTTGAGAT GGGGTCTCAT TTTGTCACCC 60
AGGCTGGAGT GCAGTGGCAC AATCTTGGCT CACTGCAGCC TCTGCCTCCT GGGTTCAAGG 120
AATTTTCCTG TCTCAGCCTC CTGCGTAGCT GGTATTACAG GCATGTGCCA CCATGCCTGG 180
CTCATTTTTT ATTTTTAGCA AAGGTGAGGT TTCACCATGT TGGCCAGGCT GGTCTTGAAC 240
TCCTGACCTC AGGTGATCTG CCCGCCTCAG CCTCCCAAAG TACTAGGGTG ACAAGCTAGA 300
GACACTGCGC CCGGCCAGGC TGAATGTTAT ACGTGTGAAC AATTGGCATT CTTCCCAAAC 360
ATCTCTTACT CTAACCGGAA ATATATGTGT ATATTAAAGG TATTTTCTGT AACTAATTTC 420
TAGGATAGTA AGTTATCATT GTATTGAATG TGCATTTTTA TGCGTAAGAA GTAATTAGGC 480
ATTCTTTGCC TGAGCTTCAT TTTTCTCCAA ATATAAAAAA GGGAGTAAAA TAAACTCATC 540
ATGTGGAAAT CTTTAAAATA ACCAAAACCA GGTTCTATTA AAGAATAATG AAAAAATATA 600
TAGAACATTT CAAAGGGTAA ACCAGAATAA ATTCTGTTCT TTGGGAACAA CAGTTAGCCA 660
CATAAATACC ACAAATCAAG GAAGGGGATT TCCTGACTTC CGCTTCCAAG CAATTCCAAT 720
AAATGAAGGA GGAAGTTATT TTCCTTTTTA AAAAACTTAC TGTTGGCAGG ATTAGTGTAC 780
TTCCTTTCAC TCTTTTAGGA TGTTAAACGC ACATACACGA ATATTCCTGT ACTTCATAAA 840
CCTTTGGGAT TTTGTCAGGT TCTGAGTATG CAGATTTTTT ATTTATTTTT TTTTTGAGAT 900
GGAGTCTTGC TCTGTCATCC AGGCTGGAGT GCAGTGGCAC GATCTCGGCT CACTGCAACC 960
TCCGCCTCCC AGGTTCAGGT GATCCTCCTG CCTCAGCCTC CTGGGTAGCT GGGATTACAG 1020
GCATGCACTA CCATGCCTGG CTAATTTTTG TATTTTTGGT AGAGACATGG TTTCACCATG 1080
TTGGCCAGGT TAGTCTGGAA CTCCAACCTC AAGTGATCCT CTGGCTTCAG CCTCCCAAAG 1140
TGCTGGGATT ACAGGTGGGA GCCATGGTGC CCAGGTCAGA AGGTTAAATT GTTTCAGTAA 1200
AAAGTCATTC TGTTGTGGAA ATGTTACAAA TGCATTGCTA AAAGGGAGAG AAACATCCAG 1260
GCGTAAACAC TTATTGTCAG GGATCCCTTA TCCTGGTGGA ATAAGCATAA ACTTTGGAGT 1320
CAGAATTAAT TTGCATTCTC TTTTACTTAT TATGAGTCAG GGGACAAGTT TCTTAGCTTC 1380
TCTAAGCCTC AGCTTCTTCC TTTGCAATAA TAACACTTGG CTGACAGTGT TATCATGAGG 1440
ATTAAATTAA ATGACATCTA GTATTCTGCT TGGCCTAGAG TACACACTCA GTAAAACTGA 1500
TCCCTTTCTC ACTTCTCCCA GGCTTAGAAG TTTTCTGGAG GTAAATTGCA TAGCCCACAG 1560
CTGAAGTTGA TCTCTTGGTT CTTCCTCATT CTTTTTTAGT AACAGAATGA TAGAAGTTTG 1620
AAAAGTACTG GAGGACAGGA GAACACCTGA GCTCAGGGAT CAGACTCTAG GATAAGAAAC 1680
TAGTTCAGCA GGAAGTGTGC ACTGTCAGCC TCTTAAGGAT CATATGCTCA AGGTGTCCAA 1740
TCCCATCGCA CATGTTTAAT ACCTCAAATG TCACTTGATG GTAGAAGACT CTCTAGGGAA 1800
CTCTGAGAAC AGTACCCAGC TGTAGTGGAA GGCTCACCTG AGAGCACCTT TTAGTCTTTC 1860
TCTATCCTTC TTTGTCCTCA TGTAATTTAA TTATGTCCTT TCTTGCTGCA GCTTTTAAAT 1920
TCAAAGACCT TTGTTATTAG TGTCTGTCAC CTTAAATTAC CAGATTTGGG CTCTCTTCAC 1980
TTCCTCCCAC CCTTATCCTG TGAAACAGAC AGTGGTACTG CCTAATTTGT TTCTGGTTGT 2040
TCCTCCCATC TCCCCAACAC ACCTGACATT TAACAATTAA TTTTATTCCA AAAAGCAGAA 2100
AAAACATTTT CCAAATGCCC TAGCTATTTA TTGAGAAGCT CTCCACATCC ATATTAGCAA 2160