EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-04169

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:228803600-228805370

Target genes

Number: 21
Name	Ensembl ID

ARF1	ENSG00000143761
MRPL55	ENSG00000162910
GUK1	ENSG00000143774
GJC2	ENSG00000198835
TRIM11	ENSG00000154370
TRIM17	ENSG00000162931
HIST3H2A	ENSG00000181218
HIST3H2BB	ENSG00000196890
HIST3H2BA	ENSG00000181201
RNF187	ENSG00000168159
FTH1P2	ENSG00000234975
RHOU	ENSG00000116574
ISCA1P2	ENSG00000229840
RAB4A	ENSG00000168118
RP5	ENSG00000240524
C1orf96	ENSG00000154429
ACTA1	ENSG00000143632
NUP133	ENSG00000069248
ABCB10	ENSG00000135776
HMGN2P19	ENSG00000229367
TAF5L	ENSG00000135801

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REL	MA0101.1	chr1:228804100-228804110	GGAAATCCCC	-	6.02
SCRT1	MA0743.1	chr1:228804848-228804863	AGGCAACAGGTGTTT	+	6.49

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I228668	chr1	228804381	228804530
GH01I228669	chr1	228804748	228804948

Enhancer Sequence

ATAAAAAATA AAGGTTTGGT CTTTGGTCCA GGTTCCTGGC ACAGAGCTTC TAAAACTGGT 60
GGAATTTCCT GAGTGATAGT CTTTTGTTAT TTATAGTAAG CCTCTTCAAC TGTACATGAG 120
TTTATGCTGA TGAGATAACT CCTGGTGGTT GCCAAGATAG CTTTAGGATG GGACCTGGTT 180
GCCAGAGTGA TTAGAGGGTT ACTCACCAAT GGCCGATGAT TTAATCAATC ATACCTATGT 240
AATGGAAGCT CCATAAGACC CCAAAGCAAT GGGGTTGAAC AGCTTCCAGG TTAGTGGACG 300
CATCCACTTG CTGGGAGGAT GCCACACCCC AGCTCCACTG GGACAGAAGC ATCTGTGCTT 360
GAGCATCTTC TGGACCTTGC TGTATATACC TTTGCACATG GCTGTTCATG TGTATCCTTT 420
GTAATGGACT GGTAAATGTA AGTAAAATGC TGAGTTCTGT GTGCTCTTCT AGCAAATATC 480
CAACCTAAAA AGAGGGTTGT GGAAATCCCC AATTTATAGC CAGTTGATGA GAAGGATGGA 540
TGGCCCCAAA TTGCGATTGG CATGTGAAGT GGGGGCTGTC TTGTGGGACC AAGCCTTTAA 600
CCTGTGAGTT TCAAGCTAAC TCTTGGTAGA TAGTGCCAGA GTTCAATTGT AGAACACTTA 660
GCTGGTGTCG GAGAAATGGT CGGTGAGGGC AAACCACCAC ACACATTTGG CATCAGAAGT 720
GTTCTGTGGG CAGAAACAGA TCATAGTAGC AATAACACAG TGCTAAGATG TCATTAGTTG 780
TGAGACACAT CCTGATTTCA CAGGCACTAA ATTATAAAAA GAGCTTTGTC TTAGAATCGA 840
TAAAATACAC CATCTCGACA GCTGTGTCTG GCTGCTCGCC CAGCCCTGCT ACCACCTGCA 900
GGCCTCTAGG TTGCTCATTT CTGATCTAAC TTTGACCTCC CTGCTGTCCT TTCAGGCCTA 960
CCTGGAAGGC TTGAGCCAGC AGACTAGCTG CCTGTTCTGG CATAGTGTCA CTTTTCTCCT 1020
CTTCTGACTT TCTGTCCTAT CGCAGACATG ACAAGGTTGG GGAATCCCAG GAACCCAGGC 1080
CAGCTGCAGA ATCAGGCAAG TCAGGGACAG ATGGTGGCCT GAATGAAAAG GGGCAGGATG 1140
GGCCTTGATG GTGTCTGAGA TTCCCCCGAT GTAGGAAGTG GGTGTCCCTG GAGGGCACTA 1200
AGCAGGGCAA TGCCATGTTT GTGTGAAACT TGACAACAGG GATTGGGCAG GCAACAGGTG 1260
TTTTCTCTAG GCTTGTAAAA ACAGGAGTTA GGTAGTACAC TGGACTTGAA CTTCTACAAG 1320
GAACACCACA AGAACCCAGT CCCCCAACCC CTGGCTGTTC CTGCTAGCAG GGTCCTAGGG 1380
CTGCTGAAAC ATTTGCAGTG TGGTTCTTAC TGGTGGTTTC ATCACAGGAG TTGGACAAGC 1440
TGCTTCCTCC CTCCACTAGT CATCACTTCT CAGCTTCCTC CAGGCCTCAG GCATTGCCTG 1500
GGTGATGCTG AGCCTGGGCC AGCAACACAG TCTTGGTGGT TCATGTTTCT TGCATTACAG 1560
CCTCTGTGCT TTTTTGGATG GAATGTTTAA CTTGGAAAAT AAAAGCTCTC ACCTCCTAAT 1620
TTTTTCTTCT GAGAGCCAGC ACAGCTAAAC CTAAGAATGT TTTTTCTGCA GGCTATAACT 1680
GAAGGACTGA GGTAATCCAT GAGCTTTTAT TAAGCCATGT CGCTGGTTAA GAACTTATGA 1740
AATGTTATTG GAATAGAACT AAAAGGCCTT 1770