EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-03345

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:182556860-182558300

Target genes

Number: 6
Name	Ensembl ID

RNASEL	ENSG00000135828
RGS16	ENSG00000143333
DHX9	ENSG00000135829
HMGN1P4	ENSG00000224040
KRT18P28	ENSG00000176855
LAMC1	ENSG00000135862

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:182558037-182558058	TTTCAATTTCACTTTCTCTGT	+	6.62
IRF1	MA0050.2	chr1:182558031-182558052	TCCTGCTTTCAATTTCACTTT	+	7

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_16180	chr1:182557172-182559046	CD4_Naive_Primary_7pool
SE_30080	chr1:182557396-182558774	Fetal_Muscle

Enhancer Sequence

GCATTTCTTA TGTCACCAGG AAGGTTGATC ACTGTGTTTG CTGACTCTGT GCATGTCCTC 60
TTTGTACAAC CCTGTGCCCC TATTTAAAGT ACAGACAATA TCTGACTTAT GTTTTTTGAC 120
TTTGATTTAT GATTTTTTGA CTTTGCAGTG GTGGAAAAGC AATAAACATT CAGTAGAAAC 180
CACACTTCAA GTACACATAC AACCATTCTG TTTTTTATTT CAGCATAGCA TTCGATAAAT 240
ACATGAGACA TTTAACACTT TATTATAAAA TAAGCTTTGA GCTAGATGAT TTTGCCCAAC 300
TGTAGCCTAA TGTAAGTGTT CTGAGCACAT TTAAGGTAAG CTAGGATAAG CTATGACGTT 360
CAGTAGATTA GGTGTATTAA ATGTGCTTTT GACCTACAAT ATTTTCAATT TAGGATGGGT 420
TTATCTGTAT GTAACCCCAT CATAAGTCAA GGAGTATCTG CAGTAGTGAA AAGAGCTTGT 480
ACTCTGACCT TAGGGAGATC TAAGTTTGAG CTTGTGGCTG TGTAATTTTT TACTATTACT 540
TCCTGTAACC TTGGATTGTT GAATCTCAAT TTTCTATTTC CTGAAATGGA GACAAAAATA 600
AATACAGTCA TGTGTGTAAA GTACATTAAA GTATGGAGTG TTGCAAATAT TAGCCACTCA 660
ATGAATGTTA GAGCTAATTA TATCCCGTTA TGAAAAAATA AATTGCTTAG TGAATTCTAT 720
TCTCCCTACA CATGTGCATA TAGCTACTAC ACGAATAGGC AACTGGCAGC TATCAATTTC 780
GTCCAACTGT CAATCAGATC TGAGAATTAC AGATCCAGTT CAATCATCAG ACAGCCCGAA 840
ACTGTTACCT GAATATTTAA ATAACTGCAT CTGCTATAGA ATTCACGAAG CAACCCTTTT 900
TCAGCAATCT CACCACTCTG ACAGTTTCAA AGCCTCAGAG GTTAATTGAT TAGCCTCTTA 960
GAAGTTTAAT TAATTGTGCA ACACATACAC GATCACCAGG CAATGAAATC TTTGAACCAA 1020
AGTGTTTGTG TAGACCGTCC CCATTACAAT CAGATGTGAG GTGGGCTGGT ATAAACAAAG 1080
GAGCCGGGAA GGAGAGGAAA TATCAAGGAA GCCCTGAGTG ACGCATCAGA GTAGAGAAGA 1140
GACGAGCCTG CGGAAGTACT CCAACAGACA ATCCTGCTTT CAATTTCACT TTCTCTGTGC 1200
GACCTGAGTA AGTCGCAAAG AGATGCCTGA GAAACTGAGG ACATGGATAA ATGACGTGTG 1260
GACTCTGACA GAACTCTGGA AGGGCACTGG AGGAAGATCC TTCCGGGCAG CCAAGGGCTG 1320
GGAGCTCCCC TCCCACTTCC CAAGTCCTCC AGCCCCTGGC CTCTCCAGTC TCCAAAGCCC 1380
AAGAATTCTT CAGGATCGAC TTATCGAGGT TTTCTAGCTT TCCTCCTTCT GCCTGCCTTA 1440