EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-02655

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:149679060-149681000

Target genes

Number: 26
Name	Ensembl ID

RP11	ENSG00000242352
RP5	ENSG00000240929
PPIAL4C	ENSG00000198161
AL358813.2	ENSG00000203815
HIST2H2BF	ENSG00000203814
HIST2H3D	ENSG00000183598
HIST2H4A	ENSG00000183941
HIST2H3C	ENSG00000203811
HIST2H2AA3	ENSG00000183558
HIST2H2BC	ENSG00000220323
HIST2H2BD	ENSG00000203819
HIST2H2AA4	ENSG00000203812
HIST2H3A	ENSG00000203852
HIST2H4B	ENSG00000182217
HIST2H2BE	ENSG00000184678
BOLA1	ENSG00000178096
HIST2H2AC	ENSG00000184260
HIST2H2AB	ENSG00000184270
SV2A	ENSG00000159164
SF3B4	ENSG00000143368
MTMR11	ENSG00000014914
OTUD7B	ENSG00000163113
VPS45	ENSG00000136631
APH1A	ENSG00000117362
MRPS21	ENSG00000187145
RPRD2	ENSG00000163125

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:149679437-149679452	TGAACTCTTGACCTC	-	7.64
RARA	MA0729.1	chr1:149679434-149679452	TCTTGAACTCTTGACCTC	-	6.45

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I121015	chr1	149678963	149680437
GH01I145160	chr1	149679185	149680660

Enhancer Sequence

GCTTTTCTCT CTTTCATGCG CTTCTCCGTT ACTCTCTCCC CATTCCGCTA CATAATTTAA 60
AAAACATCTC ATCTCTCAGG ACCTGGCCAC TGCCTCTACA ACAAGCCTCC TGGGAAGTCT 120
CGTTGTCCCA TCGACACCTC TCCCTTCTTT CGCTCCATTT TTTTTTTTTT TTTTTTTTTT 180
GACGGAGTTG CTCTGTCGCC CAGGCTGGAG TGCAGTAGCG CGATCTTGGC TCACTGCAAC 240
CTCCGCCTCC CGGGTTCAAG CGATTCTCCT GCCTCAGCCT CTCAAGTAGC TGGAATAGCA 300
GGTGCACGCC ACCACATTCG GCTGATTTTT GTATTTTTAG TAGAGACGGG ATTTCACCAT 360
GTTAGCCAGG CTGGTCTTGA ACTCTTGACC TCAAGCGATC CATCCGCCTC GGCCTCACAA 420
AGTGCTGGGA TTACAGGCGT GAGCCACCGT GCCTGGCCAA ATTTCAGGCC AACACCTGTT 480
GACACACATT GCCAGACACA CGGAATCCCT CACTGAACAC CGATGGGCCC ACAAAACACG 540
CGGAGGCCAC GGTGGCTGAA GATGTTAGCA AATTCGGTTC GCGGTGTCTG GGGTACAGCC 600
TCGAGGGTCC ATTGGCTACC TCTGTGCAAG GACCACTCTG CGCAAGGACC AGTCACCGCT 660
GCTCTCCTCA TCTCCATTGA GATTCTCCCG CACACACCTC CCCTTTCTTT GGGCCGCTGA 720
GGCCTCTTGG ACCTCCGAGG TGATTGCCCC GCCCGCAGCT TCTCTCCCTC CGGGAGCTTC 780
ATTTCTTGTT CCTCTCCGTA GTGGCTCAGC GGTAAGCCCA AGGTCCAGCA CACGAATCAG 840
GAAACTGATG GTTCTTGGGT TAGCAGGAAT CCGCCCAGAG AACAGATGAA AGTAACAGGT 900
ACCAATATCA AAACTGCAGT GACTCACCAG AAACACTACG TGCTTGCCAC TTTGCTTAGC 960
GGTTTGTTGA GTCCAACAAC TGCGTGGGTC CCGGGTTAGT CTCCTGAATA TCTTTTGCTG 1020
CTACTTTGGT CAGCGTTGTT GTCAGTTTAC CTTGTGGTGG CCAAGCCCTT AAATGCACTA 1080
TTAGGTTATG CAGTGTAATT CTGCAGGGCA GAAGGGTAAA GAGCCATAGT GAAGAGCAAA 1140
AATACCTCTT ATCTTGACCG GGAATTAAAC CCGGGTCTCC CGCGTGGGAG GCGAGAATTC 1200
TACCACTGAA CCACCAGTGC CTCTCTCTAG CAACCCTGGG AGAATTATCA AAAAGAGTAT 1260
CCAGAAAGAC TTAGAAACTT CCAAGCGGCC TTTTCAAGTG TCGACTCAAA GCTAACAAAG 1320
ACATCCAAAC CAAATGTTTT TATAGGAAAC TTTTACTAAA CAAAGTTATA AATATCAAAA 1380
TAGCTCATTT GTCGGATCAA ACTCTTAACT CTGAAAAAGG TCTTTCTACC TGCATTACAT 1440
ACCCCTATAA TAAAACGTCA CAAATTCATT CATGTTTCTT TTTTCTAATC CTAAATCTTC 1500
AATTGTCAAC GTCAAACTGC TGCCTTAGTG GTTCTGAGAA GGTAACCTAA CTGGTAGCTT 1560
AGGTAAGTAA AGTTCTAATC CAGGGAGGAA ATAAGAAGCA GAAGCAGAAT TAGAATTAGA 1620
GGAAAGAGGA AATAAAAGGA CAGAATCAAG GTAGAGATAA TGAAGAAACA AAGGTTGGTC 1680
CACTGAGTTA GTCTTTTGTC GCTGGTTTTT TTGGCAAAAG AGTAATGATC AGTCTTGTAA 1740
CCATAATACT GTTATTTGTC TGCTTGAAGA TGTATAAAGC ATTTAAAGGA AATGTGATAT 1800
AAAAAGATTA ATAATGCCTG CAGTCAATAT TTCATTGTTA GAGAGAATCC AATTTCCTAA 1860
GTTAATATGC TTTGATGTAT TAGCTATGTA AGGAGTAGAC TAGTTTAAGG AAATATTGAT 1920
GGTCAAAATA TTAACATATT 1940