EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-02523

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:144962970-144963870

Target genes

Number: 21
Name	Ensembl ID

NBPF8	ENSG00000225241
WI2	ENSG00000215861
NBPF9	ENSG00000168614
RP4	ENSG00000254539
PDE4DIP	ENSG00000178104
SEC22B	ENSG00000223380
NUDT4P1	ENSG00000177144
NOTCH2NL	ENSG00000213240
NBPF10	ENSG00000163386
TXNIP	ENSG00000117289
POLR3GL	ENSG00000121851
LIX1L	ENSG00000152022
RBM8A	ENSG00000131795
PEX11B	ENSG00000131779
RP11	ENSG00000244619
PIAS3	ENSG00000131788
NUDT17	ENSG00000186364
POLR3C	ENSG00000186141
RNF115	ENSG00000121848
PDZK1	ENSG00000174827
GPR89A	ENSG00000117262

dbSUPER

Number of super-enhancer constituents: 15
ID	Coordinate	Tissue/cell

SE_01663	chr1:144962420-144964716	Aorta
SE_03895	chr1:144961872-144976671	Brain_Anterior_Caudate
SE_05278	chr1:144961875-144964248	Brain_Cingulate_Gyrus
SE_06233	chr1:144961910-144976674	Brain_Hippocampus_Middle
SE_06980	chr1:144961903-144971642	Brain_Hippocampus_Middle_150
SE_07793	chr1:144961860-144976715	Brain_Inferior_Temporal_Lobe
SE_29575	chr1:144962249-144969949	Fetal_Muscle
SE_36911	chr1:144962485-144971785	HSMMtube
SE_40587	chr1:144961858-144971645	Left_Ventricle
SE_42105	chr1:144962091-144971577	Lung
SE_43596	chr1:144962211-144971537	MM1S
SE_48047	chr1:144959690-144971513	Psoas_Muscle
SE_48578	chr1:144962095-144966527	Right_Atrium
SE_49452	chr1:144962509-144963647	Right_Ventricle
SE_51073	chr1:144954112-144978960	Skeletal_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I148919

chr1

144961875

144964715

Enhancer Sequence

TGAGGGATAA AGAAAATTAA GCCTGCCTCT AGGCACGTCT CAAACTTGGG AGACTCAGAA 60
TACAACAGAG TATGGGATAC AGGGAGGAAA GAAGAGATGC AGAAATAAAT TAAAAACAAG 120
ATTTGTTTAA AGAGGAACTG CAACTTCTTT AATTGGGCAG ATTGAACCAA TAAAAGCACA 180
GTTCTCTCCC TTCACCTGTT ATCCTTTAGT CTCTTCAACT TTCACATTGC TTCACTCACT 240
CTCTTCCTCT CCCTTTCACC TGCTCACCTT ACCCAACTTG AACTGTGCCC TCTGATCTGA 300
CACAGGATGA CAATGACATC AGTCATTACC TAGCAGCCAT TTTTTCTGAT AACTAGAGTT 360
CTGAGTGATG ATAGTTCATG GTGAGATAAT TTCCAAGACC TCGCTAGCCA TTGGTGGTAC 420
TACTCTCCAT TAAAGACAAG GGCATTTGCT GATTGAGAAA TCAATCATAC AAGTGTCCTT 480
GGAGGCCACC AAGGCTTTGC CTGAACTGTT CTCAGCCTAT GATGGTTTCT CTTTCTAAAC 540
CTGTTCTTCT AGGTTCAGCT CAAACATCCT CTCCTATAGA AACCTTTCCC CATCCTCCCA 600
GTCAGAACTA ATGATTTCTT TTCACTTCAA CTGTACTTAG TTTATAATTT ATATGACTAT 660
AATTTAATAA CTGAGACTCT TCTGATAGTA CAAACAGGTG CTATCATAAT TACCTCTGGG 720
CAACAGGCAA AAATCAAGAT TGTCCTTAGT AAACCAGGAT TCATACCAGG TCATCTGATG 780
TTTAGTATAG CACTCACCCG ACTCTGCCTT ACATTGCTTA TTTAAAATGT CTGCCTCCCC 840
TTCTAGGTTT TATAAAAGTT CTTGGCTCAC AGTAACTCTT AGTATAAGTT TCTGAAATAA 900