EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-01569

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:52113290-52115340

Target genes

Number: 13
Name	Ensembl ID

FAF1	ENSG00000185104
CFL1P2	ENSG00000213478
RP11	ENSG00000203356
RNF11	ENSG00000123091
TTC39A	ENSG00000085831
EPS15	ENSG00000085832
OSBPL9	ENSG00000117859
GAPDHP51	ENSG00000236973
RP4	ENSG00000232846
NRD1	ENSG00000078618
KTI12	ENSG00000198841
BTF3L4	ENSG00000134717
TXNDC12	ENSG00000117862

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata1	MA0035.3	chr1:52113997-52114008	TCCTTATCTCT	+	6.02
Nr5a2	MA0505.1	chr1:52114989-52115004	GCTGGCCTTGAACTC	-	8.25

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I051647

chr1

52112748

52116179

Enhancer Sequence

AGTTTTGGCA GTTTATATCT TTCTTGGAAT TTATTGGTTT CATCTAATTT GTTGTTCCTT 60
GTATTTCCTT AGAATTTTTT TGTTTTTGTA AGATTGGTAA TAATGTTTTT TTTCTTTCAT 120
TCCTGATTTT AGTACTTTGA ATCCCCTTTT TTTTCCTTGG TCAGTCTAGC TAATGATTTA 180
TCAATTTTGT TGATTTTTTA AAGAACCAAC TTTTGGCTAG GCACAGTGGC TCGCACCTGT 240
AGTCCCAGCA CTTTGGGAGG CTGAGGCAGG TGGATTGCTT GAGCTCAGGA GTAGCCCGAG 300
AACCCCTTCT GAGTAGAACA TATCAGTTCG ATATTCCCAC TTCATGGGGG TAATCCTGTT 360
TTGTCATCCA GCTGAAAAGA CAGTAGCATT CATTTCAGAG TGGTCCTTTT TTAAGGTACC 420
GGGCCTTGTA GCTGGAGGCA GAGAGAGTGA CAGTTACTGG GCTGTAGACC ACATATCTAT 480
TTGTGCCAAT TTGCTTGAAA AAGGACATTT GTTAGCAGGT TTCAGAACAT TGGTAAGATA 540
ACACTCAGTA GGAAGATTGC TGGCGTTATG TCAGCTACCT TTCTTTCATT ACCAGAAGCT 600
ACTAGGATTC ATCAGAAATA ACCTAATATT TGGTGAATGG CATTGGCTTA GACAGATTTG 660
CTTCAGACCA GGAGGTAGCT GAAGATCACT GGCAGCTGGG ACTTTCCTCC TTATCTCTGT 720
GCTTCTCTTG CTGTGTAGGC TTGCTTTCTT CGCATAGAAG GCACAGGACC AGTGGCCTCT 780
GTACCTCACA GCTTCAAGAG CAGATAGGAG GGAGCTCTTC CCTTTGCCCC GGTTGAAAAA 840
CTTCCTGGGA GATGACTCTG TCCTGCCCTG TGGGGTAGTG GGTCCTGTGA TTGGTCAGCT 900
TCCTTTATCA GAAAAGGCTG TGTCTGGTGA AAGCAGTCAC ACCAGCTTCC CTATAGCCCC 960
GCATTAAAGC TGAGTGGAGA GAGGGAGGGA GAGGGCCCTG TGCTATTGTG AAAGAGGATA 1020
ATTTGATGCT ATTACAGCTC AGATAAGGTC TGGGAGAATG ATTTGCCGGA CAGGCATCTC 1080
CAACTGTGCA ACTCAGCCAC ATTTTACATA TGTAACACTG GGTAACTTAC TTGATATCCC 1140
TAGTGTCATT TTCATTTTTA ATATAGGAAT AATTCTTACC ATGCAAAGGC TTGTAAGGTT 1200
TACTGTATAT AAAGTGCCTG TTACATAAGG GGCAGCAATG AGTGAGGATC TGCTGCTTCT 1260
GCTATTGTTA TTATTAATGT TGCTATTATC CCTTTCTCCA AGTCCTCTTA TTTAACGGTG 1320
TTATTTTTCT AAAACACACC TTTAAGAATG CTATTGCCCT CTTTGTAAAC CTTTAGTAGC 1380
TCCCCATTAA CTATTGAATA AAGTTAAATT TCCTTAACTA CTCCATGTTT TTTTTCAGAC 1440
CCTTCAGGAT CTGGTCCCTG TAATCTTCTT TTCAGCCTCA TTTTAAAAAA TGTTTAATTT 1500
TAATTTTTTT GAAACAGTCA CACTGTTTCC CAGGATGGAG TGCAGCAGTG CCATCTCTGC 1560
TCACTGCAAC CTCCGCCTCC CAGGTTCAAG GGATTCTCCT ACTTCAGCCT CCCAAGTAGC 1620
TGGGATTACA GGTGTGCACC ACCATGCCCA GCTAATTTTT GTATTTTTAG TAGAGATAGG 1680
GTTTCACCAC GTTAGCCAGG CTGGCCTTGA ACTCCTGGCC TCACTCAAGT GATCTGCCCA 1740
CCTCAGTCTC CCAAAGTGTT GGGATTACAA GCGTGAGCCA CTGTTCCTGG CCTTCAGTCT 1800
TATCTGTAAG TTCCTGTCTG CACCCTGTGC TCTTGTCTGT ACATCTACTC TCCTATGAAT 1860
AGGAAAGTAA AGTTTTCTAC ATCTGTGCCT TCGCTGATGT TGTTTCCTTG TCTTGGAATG 1920
GCCTTTCCCC CACTACCTTC CCTTTCTTTT TATCAGATTT CTTTTTTCTT TCTTTCTTTT 1980
TTAAAGCCCC AGGTTGAAAC TTGAAACCTG ATCATTTCAG TTTTGCTTCC TTCCCTGATC 2040
TTTTTCCTTG 2050